KEGG T03765: AZ54

Xanthomonas oryzae pv. oryzae PXO86: AZ54_07755

Entry

AZ54_07755        CDS       T03765

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

xoy Xanthomonas oryzae pv. oryzae PXO86

Brite

KEGG Orthology (KO) [BR:xoy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xoy03016]
    AZ54_07755 (truB)
Enzymes [BR:xoy01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AZ54_07755 (truB)
Transfer RNA biogenesis [BR:xoy03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AZ54_07755 (truB)
Prokaryotic type
    AZ54_07755 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2 TruB_C

Other DBs

NCBI-ProteinID:

AJQ82530

Position

1569481..1570407

AA seq 308 aa
MKPRIAYRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEIVLGVTTDTDDADGEPLRERAVPDVSEADLQVALAAFIGRIQ
QQAPIYSALKQGGEPLYAKARRGEVIDAPVREVEVQAIEVLGYSAPRLTLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRAPQMITLEGLATALEAGAEAQTVLLPIEAGL
ADFARIVLDAALAARFRMGQRLRDAAFPTGQVAVFGPDGSPSGLGLVDADGRLSPQRLFN
GLNEISVC

NT seq 927 nt +upstreamnt +downstreamnt
ttgaaaccccgcatcgcttaccgcccgttgcacggcatcctgttgctggacaagccggcc
gggctcagttccaacaatgcattgcaggccgcgcgccgcttattgcgtgcagagaaaggt
ggccataccggtagcctggacccgctggccaccggcctgctaccgctctgctttggcgaa
gccaccaagatcgccggactgctgctcgggtcggccaaggcgtacgacgccgagatcgtg
ctgggcgtcaccaccgataccgatgatgccgacggcgagccgctgcgcgaacgtgcggta
cccgacgtgagcgaggccgatctgcaggtggcgctggcggctttcatcggccgcatccag
cagcaggcgccgatctattccgcactcaagcaaggcggtgagccgctgtatgccaaggcg
cggcgtggcgaggtcattgacgcgccggtacgtgaggtcgaggtgcaggcgatcgaagtg
ctgggctacagcgcgccgcgtttgacgctgcgcgtgacctgcggttcggggacgtatatc
cgcagcctggcgcgcgatctcggcgaggtgctgggctgcggcgcgcatatcgcgtcgttg
cgtcgactctgggtggagccgtttcgtgctccgcaaatgatcacgctggaggggttggcg
acagcgctggaagccggcgccgaggcgcagacggtgttgctgccgatcgaggccggcctg
gccgattttgcgcggatcgtgctcgatgcggctctcgcggcgcgtttccgcatggggcag
cgcttgcgcgatgccgcattcccgactggccaggtggccgtgttcgggcccgacggaagc
ccctcggggctgggcttggtggatgcggatggacgcttgtcgccacagcgattgttcaat
ggactgaacgagatttcagtatgttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system