KEGG T03765: AZ54

Xanthomonas oryzae pv. oryzae PXO86: AZ54_22515

Entry

AZ54_22515        CDS       T03765

Name

(GenBank) catabolite repression control protein

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

xoy Xanthomonas oryzae pv. oryzae PXO86

Pathway

xoy03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:xoy00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AZ54_22515
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xoy03400]
    AZ54_22515
Enzymes [BR:xoy01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AZ54_22515
DNA repair and recombination proteins [BR:xoy03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AZ54_22515

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2

Other DBs

NCBI-ProteinID:

AJQ85016

Position

complement(4638647..4639447)

AA seq 266 aa
MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA
STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNRSVVSFYIPSGSSGELRQ
GYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLN
GLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLR
DTLRACSIYREERFSDHAPYIVDYAQ

NT seq 801 nt +upstreamnt +downstreamnt
atgcgcatcatcagttttaacgccaacggcctgcgctcggccgccagcaagggtttcttc
gcgtggttcgccgcgcaggacgccgatgtgctgtgcgtgcaggagaccaaggcccaggag
caccaactggccgggccggacttcctgcccaccggctacaaggcttggttccgcgatgcc
agcactaaaaagggctacagcggcgtggcaatctacagccggcacgagcccgacgaggtg
cgtaccgcgctgggctggccggaattcgacgaagaaggacgctatatcgaagcgcgcttc
ggcaaccgcagcgtggtgtccttctacatcccctccggttcctcgggcgagttgcgccag
ggctacaagttccaggtgatgcaatggctgcggccgatcctggacgaatggctggccagc
ggccgccagtacgtgctgtgtggcgactggaacatcgtgcgcacggcgctggacatcaag
aactggaaatccaaccagaagaactccggctgcctgccacccgagcgcgactggctcaac
ggtctgtgcgccgacgtgccagatgacgccaacgccgccgaaggccgcggctgggtcgac
agctaccgcgtgctgcatccacaaggccaggactacacctggtggagcaaccgcggcgcc
gcgcgcaccaacaatgtcggttggcgtatcgactaccaactggtcacccccggcctgcgc
gacaccttgagggcttgctcgatctaccgcgaagagcgcttctccgaccacgcaccgtac
atagtggattacgcgcagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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