KEGG T03868: BE73

Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_21840

Entry

BE73_21840        CDS       T03868

Name

(GenBank) DNA-(apurinic or apyrimidinic site) lyase

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

xoz Xanthomonas oryzae pv. oryzicola CFBP7342

Pathway

xoz03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:xoz00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BE73_21840
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xoz03400]
    BE73_21840
Enzymes [BR:xoz01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BE73_21840
DNA repair and recombination proteins [BR:xoz03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BE73_21840

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2

Other DBs

NCBI-ProteinID:

AJQ89371

Position

complement(4595155..4595955)

AA seq 266 aa
MRIISFNANGLRSAASKGFFVWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA
STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNRSVVSFYIPSGSSGELRQ
GYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLN
GLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPCLR
DTLKACSIYREERFSDHAPYIVDYAQ

NT seq 801 nt +upstreamnt +downstreamnt
ttgcgcatcatcagttttaacgccaacggcctgcgctcggccgccagcaagggtttcttc
gtgtggttcgccgcgcaggacgccgatgtgctgtgcgtgcaggagaccaaggcccaggag
caccaactggccgggccggacttcctgcccaccggctacaaggcctggttccgcgatgcc
agcactaaaaagggctacagcggcgtggcaatctacagccggcacgagcccgacgaggtg
cgtaccgcgctgggctggccggaattcgacgaagaaggacgctatatcgaagcgcgcttc
ggcaaccgcagcgtggtgtccttctacatcccctccggttcctcgggcgagttgcgccag
ggctacaagttccaggtgatgcaatggctgcggccgatcctggacgaatggctggccagc
ggccgccagtacgtgctgtgtggcgactggaacatcgtgcgcacggcgctggacatcaag
aactggaaatccaaccagaagaactccggctgcctgccacccgagcgcgactggctcaac
ggtctgtgcgccgacgtgccagaagacgccaacgccgccgaaggccgcggctgggtcgac
agctaccgcgtgctgcatccacaaggccaggactacacctggtggagcaaccgcggcgcc
gcgcgcaccaacaatgtcggttggcgtatcgactaccaactggtcaccccctgcctgcgc
gacaccttgaaggcttgctcgatctaccgcgaagagcgcttctccgaccacgcaccttac
atagtggattacgcgcagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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