KEGG T05156: XppCFBP6546

Xanthomonas phaseoli: XppCFBP6546_14695

Entry

XppCFBP6546_14695 CDS       T05156

Symbol

XppCFBP6546P_14695

Name

(GenBank) RtcB family protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

xph Xanthomonas phaseoli

Brite

KEGG Orthology (KO) [BR:xph00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xph03016]
    XppCFBP6546_14695 (XppCFBP6546P_14695)
Enzymes [BR:xph01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     XppCFBP6546_14695 (XppCFBP6546P_14695)
Transfer RNA biogenesis [BR:xph03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    XppCFBP6546_14695 (XppCFBP6546P_14695)
Prokaryotic type
   tRNA splicing ligases
    XppCFBP6546_14695 (XppCFBP6546P_14695)

SSDB

Motif

Pfam:

RtcB Hexapep Gam

Other DBs

NCBI-ProteinID:

ATS30803

UniProt:

A0A0A3XJK0

Position

4409995..4411218

AA seq 407 aa
MSTSQHFEFLHAEGSSTPIKGWVRGVPLEEQAHAQLRNIAAVPFVGPWVAVMPDVHLGKG
ATVGSVIPTRGAIIPAAVGVDIGCGMAAVRTTLRANDLPDSLAQLRSSIERSVPVGNGRG
GEHRKLPDSIQTRIAQSGLVQRLDAIKQQHKRIRTDKLDCQIGTLGGGNHFIEICLDETD
AVWVMLHSGSRGTGNLIGTYFIERAREQLAHRVLGFHLPDKDLAFFMQGEPLFDEYVEAV
SWAQDYARENREAMMARVLAEMRHRLPKFQLEKLAVNCHHNYVQKETHGGEELLITRKGA
VSARAGELGIIPGSMGTRSHIVRGLGNADSFHSCSHGAGRVMSRTAARAQITLAQHREAT
AHVECRKDAAVIDESPAAYKSIDAVMAAQRDLVEVLHTLRQVVCIKG

NT seq 1224 nt +upstreamnt +downstreamnt
atgagtacatcacaacactttgaatttctgcacgccgaaggcagcagcaccccgatcaag
ggctgggtacgcggcgtgccgctggaagagcaggcgcatgcgcagctgcgcaatatcgca
gcggtcccgtttgtcggtccgtgggtcgcggtgatgccagacgtgcatctgggcaaaggc
gcaaccgtgggctcggtgattccgacccgtggcgccatcatcccggcggcggtcggcgtg
gatatcggctgcggcatggcggcggtgcgcaccacgctgcgcgccaacgacctgcccgac
agtctggcgcagctgcgttccagcatcgagcgcagcgtgccggtgggcaacggccgtggc
ggcgagcaccgcaagctgccggacagcatccagacccgcatcgcgcagtccgggctggtg
cagcgtctggacgccatcaagcagcagcacaagcgcatccggaccgacaagctggactgc
cagatcggcacgctgggtggcggcaaccatttcatcgagatctgcctggacgaaaccgat
gcggtctgggtgatgctgcacagcggttcgcgcggcaccggcaacctgatcggcacgtat
ttcatcgagcgcgcgcgtgagcaactggcgcatcgcgtattgggttttcatctgcccgac
aaggacctggccttcttcatgcagggcgagcctttgttcgacgagtatgtcgaagcggtg
tcgtgggcgcaggattacgcccgcgaaaatcgcgaggcgatgatggcgcgcgtgctggcc
gagatgcgtcaccgcttgcccaaattccagctggaaaagctcgcagtcaattgccaccac
aactatgtgcaaaaggaaacgcacggtggcgaggaattgttgatcacccgcaagggcgcg
gtcagcgctcgtgccggcgagctgggcatcattccgggcagcatgggcacgcgcagccac
attgtgcgcgggttgggcaacgccgacagtttccacagctgcagccacggcgcagggcgc
gtgatgagcaggaccgctgcacgcgcgcaaatcaccctggcacagcatcgcgaggccacc
gcacatgtggaatgccgcaaggacgcggcagtgatcgacgagtcgcctgccgcgtacaag
tccatcgatgcagtgatggcggcgcagcgggatctggtcgaggtgctgcacaccttgcgc
caggtggtgtgcatcaagggatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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