KEGG   Xenorhabdus poinarii: XPG1_0980
Entry
XPG1_0980         CDS       T03805                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase srmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
xpo  Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:xpo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xpo03009]
    XPG1_0980 (srmB)
Enzymes [BR:xpo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     XPG1_0980 (srmB)
Ribosome biogenesis [BR:xpo03009]
 Prokaryotic type
  rRNA helicases
   XPG1_0980 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 AAA_30 CMS1
Other DBs
NCBI-ProteinID: CDG20635
UniProt: A0A068R3C9
Position
complement(954374..955714)
AA seq 446 aa
MTATNFSEFELDEALLDALTEKGYERPTAIQEAAIPAAMDGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEQAKQFAAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFANDVETIAGETRW
RKQTLLFSATLEGDAIRDFAKRLLTDPVEIDAEPSRRERKKIQQFYYRADTLEHKTALLT
HLLQQPDVTKSIVFVRKRERVREVVDWLSGAGIQACFLEGEMVQAKRTEAVKRLNDGKVN
VLVATDVASRGLDIDNISHVFNFDLPRTADVYLHRIGRTARAGRKGTAIALVEAHDTPLL
GKISRYLNEPLKVRVVDELRPQTKAPSEKKNYKPSKKVLAKRKEKKKTEETKKKHVKVRH
RDSKNIGKRRTPSGKPRAELAESSND
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgactgcgacaaacttttccgaattcgaacttgacgaagccctgcttgatgcgctgact
gaaaaaggctatgaacgcccgacagcaattcaagaggcggctattcctgctgctatggat
ggacgtgatgtcctgggctccgcccccaccggtacgggtaaaaccgccgcttacttactg
ccggtactacagcatttactggattttcctcgcaaaaaatcggggcccccacgtatcctg
attttaaccccaacccgtgaactggcgatgcaggttgccgaacaagcaaaacaatttgcg
gcacacacacacttggacattgctaccatcaccggtggtgttgcctatatgaatcacgcg
gaagtcttcagcgaaaatcaggatattgttgtcgcaactacagggcgtctgttgcaatac
atcaaagaagagaattttgattgccgcgcggttgaaacgctgatccttgatgaagctgat
cgtatgctggatatgggattcgccaatgatgttgaaacgattgcaggtgaaactcgctgg
cgcaaacaaacattattgttttcagccacactggaaggcgacgccattcgtgattttgcc
aagcgtctgctgacagatcccgtcgaaattgatgctgaaccttctcgccgcgaacgtaag
aaaatccagcaattttattatcgggctgatacgttagagcacaaaaccgctttgctgact
catctcctccagcaacctgatgtgaccaaatccattgttttcgtacgcaaacgggagcgg
gtacgtgaagttgtcgattggctgagcggcgcaggcatccaggcgtgtttccttgaaggt
gaaatggtacaagccaaacgtaccgaggccgtgaaacgtctgaatgatggaaaagtcaac
gtgctggtcgcaaccgatgtggcttcccgtggattagatatcgacaatatcagccatgtt
tttaacttcgatttaccccgtaccgcagatgtttacttgcaccggattggccgtactgcc
cgcgctggccgtaagggaaccgccattgctctggttgaagcacacgatacgcctctcctg
ggaaaaatcagccgttatctcaatgagcctttgaaagtacgcgttgttgatgaactccgc
ccacaaaccaaagcaccaagtgagaaaaaaaactataagccatccaaaaaagtgctggca
aaacgcaaagaaaagaagaaaacagaagaaaccaagaaaaagcatgtaaaagttcgtcat
cgtgacagtaaaaatatcggcaaacgccgcacaccttctggcaaacctagagcagaatta
gcggaatccagcaacgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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