KEGG   Xanthomonas sacchari: SB85_05530
Entry
SB85_05530        CDS       T03566                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
xsa  Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:xsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xsa03016]
    SB85_05530
Enzymes [BR:xsa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SB85_05530
Transfer RNA biogenesis [BR:xsa03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SB85_05530
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AJC45295
Position
1364433..1365518
AA seq 361 aa
MPYWIKQPAELSERLAQRPARIGLDTEFVRERTYWPQLALVQMAVGDEILLIDPLIPGMP
QALAPWLSDPDILKIMHSASEDLVAFKCACGTLPRPLFDTQIAAGLAGLGAGMGYQKLVL
EITGVHLAKGETRSDWLRRPLSPAQLEYAADDVRHLFALHDNLQARLQTLERGDWLHEDG
ERLLGTVEHDDGERWPHLGMRSAQFMDRPAQLRLLRLLRWRDAQARHNDKPRSWILDNEL
AATLARFPPQDQPAMLALFDKHPKAPRKLSDAVWQALTTPLTDETDAPQALAASDDNKAA
LKRLQDAVAARSAELGLPDGLLASRKHLEALLESAQWPAPLAGWRRRELEPRLQPLLAAT
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgccttactggatcaagcaacccgccgagctgagcgaacggctggcgcagcggccggcc
cgcatcggcctggataccgaattcgtccgcgaacggacctactggccgcaactggcgctg
gtgcagatggccgtaggcgacgaaatcctgctgatcgacccgctgatcccgggcatgccg
caggcgctggcgccgtggctgagcgacccggacatcctcaagatcatgcacagcgccagc
gaagacctggtcgccttcaagtgcgcctgcggcaccctgccgcggccgctgttcgacacc
cagatcgccgccggcctggccgggctcggcgccggcatgggctaccagaagctggtgctg
gagatcaccggcgtgcacctggccaagggcgagacccgctcggactggctgcgccgcccg
ctgtcgccggcgcaactcgaatatgccgccgacgatgtgcgccatctgttcgcgctgcac
gacaacctgcaggcgcggttgcagaccctggagcgcggcgattggctgcacgaggacggc
gaacgcctgctcggcaccgtcgagcacgacgacggcgaacgctggccgcacctgggcatg
cgctcggcgcagttcatggaccgccccgcgcaactgcgcctgctgcgcctgctgcgctgg
cgcgacgcgcaggcccgacacaacgacaaaccgcgcagctggatcctggacaacgaactg
gccgccaccctggcgcgcttcccgccgcaggaccaaccggccatgctggcgctgttcgac
aaacaccccaaggcgccgcgcaagctcagcgatgcggtgtggcaggcgctgaccacccca
ctgaccgacgaaaccgacgccccgcaggcgctggccgccagcgacgacaacaaggccgcg
ctgaagcggctgcaggacgcggtggccgcgcgcagcgccgaactcggcctgcccgacggc
ctgctcgcctcgcgcaagcacctggaagccctgctggaaagcgcgcaatggccggcaccg
ctggcgggctggcgccggcgcgaactggaaccacggctgcagccgctgctggcggccacg
cgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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