KEGG   Xenopus tropicalis (tropical clawed frog): 100038208
Entry
100038208         CDS       T01011                                 
Symbol
irx1
Name
(RefSeq) iroquois-class homeodomain protein irx-1
  KO
K24889  iroquois-class homeodomain protein IRX
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100038208 (irx1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    100038208 (irx1)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain Dicty_REP
Other DBs
NCBI-GeneID: 100038208
NCBI-ProteinID: NP_001188351
Xenbase: XB-GENE-486817
UniProt: Q6F2E3
Position
6:68199522..68204629
AA seq 467 aa
MSFPQLGYPQYLSAGQAAVYGGERPGVLAAAAAAAAAAAAAGSGRPTGADLGSSSTAAVT
SVLGMYASPYSAPNYSAFLPYTTDLTLFSQMGSQYELKDNPGVHPATFAAHTTPGYYPYG
QFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWGARSKEDDNIFGSDTEGDHEKNEDDEEIDLESIDIDKIDDNDGEQSNE
EEDEKLEHLRQGEKESFKKESEVMIPSSDGLKSKDSLSLGKESSDTSNTRIVSPGGQGNI
QVPPHNKPKIWSLAETATSPDGALKSSPPPSQANHTSPPIQHPAFLPSHGLYTCQIGKFH
NWTNGAFLTQSSLINMRSLLGVNPHHVAHHNHHHLQAHQQAPLLATNLSSLSSDKTPERT
SPKHSDRENLPRTESPPQLKPSFQAVRENTLSQQEGTSRILTALPSA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtccttccctcagctgggctacccccagtacctgagcgctggccaggctgcagtctat
ggaggcgaacggccgggtgttttggccgcggcagcggcagcagcggccgcagcagcagca
gccggatccggaaggccgacaggagctgatctgggcagcagttctaccgcggcagtgacc
tcagtgctgggcatgtatgccagcccctacagcgctcccaactacagcgcctttctaccc
tacaccaccgatctcacccttttctcccaaatgggatcgcagtatgaactgaaagacaac
cccggtgtccacccagccacatttgctgcacacactactccaggctattacccctatgga
cagttccaatacggagacccagggcggcccaagaatgccaccagggagagcaccagtacc
ctaaaggcttggctcaatgagcacaggaagaacccttaccccaccaagggggagaagatc
atgctggccataatcaccaagatgaccctcacccaggtctcaacgtggtttgcaaacgct
cggaggaggctaaagaaggagaataaggtcacttggggggcaaggagtaaggaagatgac
aacatctttgggagtgatactgaaggagaccatgaaaaaaatgaagatgacgaggaaata
gatttggaaagcatagatattgataaaattgatgacaacgacggtgagcaaagcaatgag
gaagaggatgagaaactggagcacttgagacagggcgagaaagagagtttcaaaaaggag
agtgaagtgatgattccaagttccgacggacttaaatcaaaagactcattgtcccttggt
aaggaaagttctgataccagcaataccagaatagtaagccccggtgggcagggcaacata
caagtgccacctcacaataaaccaaaaatctggtccttggcagaaacagcaacaagtcca
gatggggccttgaagtcttctcctccaccttctcaagccaatcacacatctcccccaatt
cagcacccagcctttctccccagccatggactatacacatgccaaattggcaaatttcac
aactggacaaacggggcctttctcacacagagctccctgataaacatgaggtccttgctg
ggagtaaaccctcaccatgtggctcaccataaccaccatcaccttcaggctcaccaacaa
gctccattgttagcaacaaacctgagttccctcagcagcgacaaaactccagaacggacc
agccccaagcactcagacagagaaaacttacccagaaccgaatctccacctcagttaaaa
ccttccttccaagctgttcgtgaaaacaccctttcacagcaagaaggcacctctcgtata
ttgacagcacttccctctgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system