KEGG   Xenopus tropicalis (tropical clawed frog): 100124917
Entry
100124917         CDS       T01011                                 
Symbol
opn1lw
Name
(RefSeq) long-wave-sensitive opsin 1
  KO
K04251  long/medium wavelength-sensitive opsin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:xtr04030]
    100124917 (opn1lw)
G protein-coupled receptors [BR:xtr04030]
 Rhodopsin family
  Vision
   Opsin
    100124917 (opn1lw)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7TM_GPCR_Srw Cytochrom_B_N_2 7TM_GPCR_Sru 7TM_GPCR_Srsx MpPF26
Other DBs
NCBI-GeneID: 100124917
NCBI-ProteinID: NP_001096331
Xenbase: XB-GENE-955009
UniProt: A4IHY8
Position
8:32348735..32353756
AA seq 365 aa
MASHWNEAVFAARRRNDDDDTTRSSVFTYTNSNNTRGPFEGPNYHIAPRWVYNISSLWMI
FVVLASVFTNGLVLVATLKFKKLRHPLNWILVNMAIADLGETVIASTISVCNQIFGYFVL
GHPMCILEGYTVSVCGIAALWSLTVIAWERWFVVCKPFGNIKFDGKLAATGIIFSWVWAA
GWCAPPIFGWSRYWPHGLKTSCGPDVFSGSSDPGVQSYMLVLMITCCIIPLAIIVLCYMH
VWLTIRQVAQQQKESESTQKAEREVSRMVVVMIIAYIFCWGPYTFFACFAAFNPGYNFHP
LAAAMPAYFAKSATIYNPIIYVFMNRQFRNCIYQLFGKKVDDGSEVSSTSRTEVSSVSNS
SVSPA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggcttcccattggaatgaggcagtttttgctgctcggaggaggaatgatgatgatgac
acaacaagaagtagcgttttcacatatacaaacagcaacaacacaagaggtccatttgaa
ggcccaaattaccacattgctccacgatgggtctataacatctcttcactgtggatgata
tttgttgttttagcttctgtgttcacaaatggcttggtcttggttgccaccttaaaattc
aagaaacttcgccaccctttgaattggattcttgtcaatatggctattgcggatcttgga
gagacagtcattgcaagtactattagtgtatgcaaccagatttttggttacttcgtgctc
gggcatccgatgtgtatcttagaaggctacactgtttcagtctgtggtattgctgctcta
tggtccttgactgtcattgcctgggaaagatggttcgtggtctgcaaaccttttggaaac
attaaatttgatggaaaattggcagctactggtataattttctcttgggtttgggctgca
ggctggtgtgcacccccaatattcggatggagcaggtattggcctcatggcttgaagaca
tcgtgtggtccagatgtattcagtggcagctcagaccctggagtccaatcatacatgctt
gtccttatgattacatgctgtattataccattagctatcattgtcttgtgttatatgcat
gtatggctgaccattcggcaggtagcacagcagcagaaggaatcagaatctactcagaaa
gctgaacgagaagtatcccgtatggtggtagtgatgatcatcgcttatatcttctgctgg
gggccctacactttctttgcttgttttgctgctttcaacccaggttacaacttccaccca
cttgcagctgcaatgcctgcctactttgccaagagtgccacaatttacaatccaattatc
tatgtgttcatgaacagacagttccgaaactgtatctatcaactgtttggcaaaaaggtc
gacgatggatcagaagtgtcctctacttccagaacagaggtgtcttctgtctccaactct
tcagtgtctcctgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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