KEGG   Xenopus tropicalis (tropical clawed frog): 100124945
Entry
100124945         CDS       T01011                                 
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100124945 (hspd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100124945 (hspd1)
   03110 Chaperones and folding catalysts [BR:xtr03110]
    100124945 (hspd1)
   03029 Mitochondrial biogenesis [BR:xtr03029]
    100124945 (hspd1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100124945 (hspd1)
Enzymes [BR:xtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     100124945 (hspd1)
Messenger RNA biogenesis [BR:xtr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     100124945 (hspd1)
Chaperones and folding catalysts [BR:xtr03110]
 Heat shock proteins
  HSP60 / Chaperonin
   100124945 (hspd1)
Mitochondrial biogenesis [BR:xtr03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    100124945 (hspd1)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100124945 (hspd1)
  Exosomal proteins of other body fluids (saliva and urine)
   100124945 (hspd1)
  Exosomal proteins of breast cancer cells
   100124945 (hspd1)
  Exosomal proteins of colorectal cancer cells
   100124945 (hspd1)
  Exosomal proteins of bladder cancer cells
   100124945 (hspd1)
SSDB
Motif
Pfam: Cpn60_TCP1 Apolipoprotein K-cyclin_vir_C EAD9 DUF5398 DUF2913
Other DBs
NCBI-GeneID: 100124945
NCBI-ProteinID: NP_001096355
Xenbase: XB-GENE-980059
UniProt: A0A803KIS9
Position
9:complement(46506950..46536739)
AA seq 576 aa
MLRIQRILRHAKPASRALSLSLSRQYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMMAVDAVIKELKNQSKPVTTPEEIAQVATISANGDQ
EIGKIISDAMKRVGRRGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAISSGGVVFGEEGLTLNIEDIQPHDFGKVGEVIVTKDDTMLLKG
KGDKAQIEKRIQEIHEQLESTNSEYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALEALNPANEDQRVGIEIIRRTLKIPAMTIA
KNAGVEGSLVVEKIIQSPVEIGYDAMHAEFVNLVEKGIIDPTKVVRTALMDAAGVASLLT
TAEAVVTEIPKEEKDGGMAGMGGMGGMPGGMGGGMF
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgctgagaatacaaagaattctgcgacatgcaaagccagcttccagagcgctgtccttg
agcttgagccgccagtatgccaaagatgttaagtttggggctgatgcaagagcacttatg
cttcaaggggttgatctcttggctgatgcggtggctgtgacaatgggacccaagggaaga
actgttattatcgaacaaagctggggaagtccaaaagtaaccaaagatggcgtaacagtt
gcaaaagcaattgatctgaaagataaatacaaaaacataggtgccaaactagttcaagat
gtagctaacaacacaaatgaagaagcaggtgatggaacaaccactgcaactgtccttgca
aggtctatagctaaagaaggctttgaaaagataagcaaaggtgcaaatccagtagaaatt
agaagaggtgtaatgatggcagtagatgcggtcatcaaagagttaaaaaatcagtcaaaa
cctgttacaacaccagaagagatagctcaggttgctaccatatcagcaaatggtgatcaa
gaaattggcaaaataatatcagatgcaatgaaaagagttggtcgtagaggtgtaattaca
gttaaggatggcaaaactcttcatgatgagctggaaataattgaaggcatgaaattcgac
agaggctatatttcaccatactttataaatacagctaaaggccagaaatgtgaattccag
gatgcatatcttctccttagtgagaaaaaaatttccagtgttcagtctattgtgcctgct
cttgaaattgctaatgctcaccgtaaaccgctagttataatagctgaagatgttgatgga
gaggcgttaagcacattagtgttaaacaggctgaaagttgggctgcaagtagttgccgta
aaagctccaggttttggggataaccgaaaaaaccagcttaaggatatggcaatttcatct
ggtggggtggtgtttggggaggagggtctcaccctaaatattgaagatattcagccccac
gattttggcaaagtaggagaagttattgtaactaaagatgacactatgttattgaaagga
aagggtgacaaagctcagattgagaaacgtattcaagaaattcacgaacagttggaatct
acaaacagtgaatatgaaaaggagaagttaaatgagagattggctaagctgtctgatggt
gttgctgtaataaaggttggtgggacaagtgatgtcgaagttaatgaaaagaaagataga
gtaactgatgcattaaatgccacccgtgcagctgtggaagaaggcattgttttgggaggg
ggctgtgccttgctccgatgcatcccagcactggaagccctaaacccagccaatgaagac
caaagagtgggcattgaaatcataaggagaacactgaagattcctgcaatgaccatcgca
aaaaatgcaggtgttgaaggatcattagtggtagaaaagatcattcagagtccagttgag
attggatatgatgccatgcatgctgaatttgttaacttggtggaaaaaggcattattgac
cccacaaaggttgtgaggacagctttgatggatgctgccggtgttgcttcactcttgaca
acagctgaagcagttgtgactgaaattccaaaagaagaaaaagatggtggcatggccgga
atgggaggaatgggaggcatgcccggtggtatgggaggtggaatgttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system