KEGG   Xenopus tropicalis (tropical clawed frog): 100124961
Entry
100124961         CDS       T01011                                 
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
  KO
K15326  tRNA-splicing endonuclease subunit Sen54
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xtr03016]
    100124961 (tsen54)
Transfer RNA biogenesis [BR:xtr03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    100124961 (tsen54)
SSDB
Motif
Pfam: tRNA_int_end_N2 tRNA_int_endo_N THAP4_heme-bd
Other DBs
NCBI-GeneID: 100124961
NCBI-ProteinID: NP_001096368
Xenbase: XB-GENE-969117
UniProt: A4II78
Position
10:44547278..44559170
AA seq 229 aa
MLSPEELLAARSREKSIPQRSHGQKDFLPDGSEAQNEKLRLCRAEQWELLKEERVERLGS
LVKGIWRPKEDLVELTSPAGKFWQTMGFTHQGKQCLLPEEAVYLLECGAVQLFYHDSLLS
VLDQISVMERSFLLDDYESWAQSYRKAESQISFNVYQADGASEFKKSRPGKPYTRMCVRS
FSDQVPSLGTVKSLGYQSKDVPLIFALVDNGEVAFYSFKDFELPVDVYP
NT seq 690 nt   +upstreamnt  +downstreamnt
atgctcagcccagaggaactgcttgccgccaggagccgtgagaagagcatccctcagcgc
tcccatgggcaaaaggactttctgcccgacggctccgaggctcagaacgagaagctgcgg
ctgtgccgcgccgagcaatgggagctgctaaaagaggagcgtgtggagcgattgggcagt
ctggtgaaaggcatatggagaccaaaggaagatttggtggaactgacatcccctgcgggc
aagttctggcagacaatgggttttacacaccaggggaagcaatgccttttgccggaagaa
gcagtgtacctgttggaatgtggtgctgtccagctattttaccacgattcactattatct
gtcctggaccagatcagtgtgatggaacggtcattcctattggatgattatgagagctgg
gcacagagctataggaaagccgagtcgcagattagctttaatgtgtatcaggccgacgga
gcctccgagttcaagaaatccagaccagggaagccatatacacggatgtgtgtgcgcagt
ttttctgatcaggtgccctcccttgggacggtgaagtcgctgggctaccagagcaaggac
gtcccgctcatatttgccctcgtagacaatggagaagttgccttttactccttcaaggac
tttgagctcccggtggacgtgtacccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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