KEGG   Xenopus tropicalis (tropical clawed frog): 100134999
Entry
100134999         CDS       T01011                                 
Symbol
ranbp2
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013  Nucleocytoplasmic transport
xtr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100134999 (ranbp2)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100134999 (ranbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100134999 (ranbp2)
   03110 Chaperones and folding catalysts [BR:xtr03110]
    100134999 (ranbp2)
   04121 Ubiquitin system [BR:xtr04121]
    100134999 (ranbp2)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100134999 (ranbp2)
Chaperones and folding catalysts [BR:xtr03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    100134999 (ranbp2)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100134999 (ranbp2)
SSDB
Motif
Pfam: Ran_BP1 IR1-M zf-RanBP VID27_PH TPR_16 TPR_1 TPR_14 TPR_2 TPR_8 T6SS_VasJ
Other DBs
NCBI-GeneID: 100134999
NCBI-ProteinID: XP_002937704
Xenbase: XB-GENE-492821
UniProt: A0A6I8RLR9
Position
2:complement(109272222..109315525)
AA seq 2842 aa
MRRSKAELQRYIENAQNSATSPREKSMKGFLFARLYYEAKEYELAKRCVSSYISVQERDP
KAHRFLGQLFEIEGNVEKAVGCYKRSLELNPTQKDLVLRIAELICTLNIKDGRAEYWVDR
ASKLFPGSPEIYRLKEQLLSSQGEAGWNQLFDLIQAELFARPNDVYVNIKLVDLFLSNQR
LEEAVWHCLKPERRALRTDLEWCSRVVQVFKEYLASKQGQKNTNVKTITKELLLAHSDVV
LLTLSKKDVWKSKEALERFDQALLSVKQSVSGTDATDLSVTFYEMRGHYYMHAGTLLLKM
AQNSEVQWKALIEPAALCYLLAYQVPKPKSKPVKGEDNGQGFLEGLAFDRQSKSGHLLLT
LSHGKENFISEVIETFANQCGQSILLKFLFEDNLSMQDSFMGSDDISYAENRVPDLNELS
QLDSGSLRIHNGDLQHLTWLGLQWHFLANLPPFRKWLKQVFPRVPQETSRLESNIPESIC
LLDLEVFLLAVVHTSHLQLQDNNTTADPNRPRCLPLPICKQLFTDRQRSWWDAVYNLITK
KSLPGTSAKLRPVIQHDLTTLRAQEKHGLQPAVLVHWARSLHKTGYSLNSFYDQKEYMGR
CVHYWKKLLPLLDLVKQKKSIPEPVDPLFKHFHSKDIKLSEVKDLEDDACLAFATLDLVD
GKTEDAIIAFDAVKNVVAYWNLALIYQRKAEEIENDCLPAEEQEEFQECLLKCKGYLKMI
CDEYNADPSIATLLPVPVETVIEMLESVKQNLGEAMEDRSLGFVENHSAIKHSTPSPSKL
SISPSKPTRFSPKTPPRWAEDQKSLLEVLCNKVEALKKEVQELKHNNSNANASPHRWPNE
GFEPDSVADGYQGTQSFYTVPLTVSTSGPAAYYAQSPAYNSQHLLRPAANITPTKTSVYA
MNRLPPQQHMYAYPQPMHTPPTQQSSAACVFPQEIYGPPLRFESPATAILSPHNEEFYNY
SVPPASTNPPLPEPGYFTKPSTAMQHSKQEVPKVSDLGKGCLGQSTSEGQKPSPFTGPMQ
STPAPSTFKFNSNFKSNDGDFTFSSSQAGAQPSSAYTGSESLLGLLTSDRPTLEQEKKSS
SFEKIANDEKSMFRFGEKSFSSGFSITGTQSQDKNPLVFGQTENIFTFKSSAKSTFAPPT
FGVQPKDAHNLSVESDAGSEHAAADDDGPHFEPIVPLPEKIEVRTGEEDEEEMFCNRAKL
FRFDAETKEWKERGIGNVKILRHRVSGKIRLLMRREQVLKICANHYINADMKLKPNATSD
KSYVWNAYDYADEMPKPEQLAIRFKTVDEAVLFKTKFEEAQRLLALTESPVAPVQEKNAK
YKQKVDSSKPNETPLTFGSQFALKRGEWQCDCCLAKNAPTSTSCVCCQTPNKNQSSLTSS
TCISAPSFTFGKESATNKLGFGQQLLKNKEQWTCSKCLQKNDALVSLCSYCQTQNQAKTG
ISQPNKASTGFTNNVSAQGDSLAAVFGKKPGQWDCDACYVRNEPSANKCVSCQNTKPLSK
AVAQAASFSFAPGADNSQKNFGAQFAKKEGQWDCNSCLVRNEASASNCVACQSANPQATN
KDAVPPAQTPSGFKFGPYAEFGKTQPSLSAMFSRKEGQWECSTCLVINDASKENCAACQT
AKPGSSASQSKEVPFTFGIKANSSQNFGQPVAGFNCDFSGKGFKFGISDEKSSASNFAFQ
APVSNDESKVVKEGFNFPLSAGPLTFNFGISDSNKTKEMSAGFMKGTSTNDKESETAKTT
TKSEKSQQCSDKVLGQSVQSFSFADIAKTSDTEGFNFGKVDPNFKGFSGAGQKLFISQNA
KSNEAVASNEQEATDDLYKTEERDDIHFEPIVQLPDKVDLVTGEEDEKTLYSQRVKLYRF
DATSGQWKERGVGNLKILKNDVNGKLRMLMRREQVLKVCANHWITTTMNLKPLTGSDRSW
MWMANDFSDGDARLEQLAAKFKTPEQAEDFKTKFDECQRLLLDIPLQTPHKLVDTGRTAH
LIQKAEEMKTGLKDLKTFLTDKAKPLDESNVTGSTEVVKQSPADGTEPTFEWDTYDMRGE
ALEGNLDDSIYASPLASSPEKKNLFRFGESASGFNFSFQPEPSPSKSPTKLNHSRVSVGT
DEESDVTQEEERDGQYFEPVVPLPDLIEVTSGEENEQALFCHRAKLYRFDKDSNQWKERG
IGDLKILQRLDNKSARVVMRRDQVLKLCANHRITTDINLQPMKGAERAWVWTAHDFAEGE
GKTECFAVRFKLQEAADLFKEGFEEAKEAQAKNCLLTPFSSRGTSPRAASCGKAAIAILE
ETTKERTDQQPEEDTSLTEAGTSSPTDQPAKALVSPAKFTFGSDAVKNIFGSEKKMPFAF
GNTSSTRSLFGFSFNASQEEVQKQPPEITLDFTSTIEAPEMSALQKSCQGSEQSPIVSSS
LTSSSVSSSTLMQPMPARDKVDDVPDADISSDVLIVYEVTPTPEQKALAEMLLLPLTFFC
YKNNPGYVSDESDIDDEDFETAVKNLNGILYPEDKKDKASAQLSGHSKEPTAESDQDCVI
VWEKKPTPEEKAKADSLKLPPTFFCGLGSDTDEDKDNLEDFDTEVRKVKEAKGVPEKDVN
SSYEAPIVCAAKTSVSLPPKQEPDSTTIISQEPVDLSSKQELPKTDSTSKGFSASSFSFG
LGTVSGVSFADLASENSGDYAFGSKDTSFQWANAGAAVFGSYSKSKKGEDEDGSDDEVVH
SDDVHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRAVNQWKERGVGDIKILFHKEK
GYYRVLMRRDQVLKVCANHVISTEIKISPLNTSTNSLVWTATDYSDGEGKVEQLAVRFKT
KELTDSFQSKFEECQQNLTEQS
NT seq 8529 nt   +upstreamnt  +downstreamnt
atgaggcgaagtaaagcagagctccagagatacatagaaaatgcgcagaacagcgcgaca
tcacccagagagaaatcaatgaaaggatttctttttgctagactctactatgaggctaaa
gaatatgaacttgctaaaagatgtgtgtcttcgtacattagtgtacaggaaagagaccca
aaagcccacagattccttggacaactgtttgagattgaaggaaatgtggaaaaagctgtt
ggctgttacaagcgttcattggagttaaaccccactcagaaggatcttgttcttaggatt
gctgagttgatatgtactctaaatatcaaagatggcagagcagaatactgggtggacaga
gcatccaaactcttcccaggaagtcctgagatatacagacttaaagaacaactactttcc
tcacaaggagaagctgggtggaatcagctcttcgatttaatacaggccgaactttttgca
aggcccaatgatgtgtatgttaatatcaagcttgtagatttgtttctgtccaaccaaaga
ctggaggaagcagtttggcattgccttaaacccgagagaagagctttaaggacagattta
gaatggtgctcccgtgttgtccaagtatttaaggagtatctggcttcaaaacaagggcaa
aagaacaccaatgtgaagacaataacaaaggaactgttgcttgcgcattctgatgttgtc
cttttgactctttctaaaaaggatgtttggaagagtaaggaagcccttgaaagatttgac
caggccctcttgtcggtaaaacaatctgtgagtggtacagacgctactgatctgtctgta
acgttttatgaaatgagaggtcactactacatgcatgctgggaccctgctactgaaaatg
gctcagaactctgaagttcagtggaaggctttaattgaacctgctgctctctgctacctt
ctggcttatcaggttcctaagccaaaaagtaagcctgttaaaggggaggacaacggacaa
ggttttctagaaggattagcgtttgaccggcaaagtaaatctggtcacttattgctaact
ttgagccatggaaaagagaacttcattagtgaggttatagaaacttttgcaaaccaatgt
gggcagtctattttactgaagtttctgtttgaggacaatttatcgatgcaagattctttc
atgggtagcgatgatataagctatgccgagaatcgtgtgccggacctaaatgagctttcc
cagcttgacagtggttctcttcgaatacataatggtgatcttcagcacctaacttggctt
gggttgcagtggcactttctagcaaatttacctccatttcgcaagtggcttaaacaggtt
tttcctcgggtgccccaggaaacttcaagacttgagtccaatattccagaatctatctgt
cttctggatcttgaggtatttttgctggcagttgtgcatactagtcatcttcagttacaa
gataataacacaacagctgatccaaacagacctcgatgtcttcctcttcctatctgcaaa
cagctctttaccgacaggcagcggtcctggtgggacgctgtttacaaccttattacaaaa
aaatctttacctggcacctcagcaaagctgcgtcctgtgattcaacatgatcttactact
ctaagagctcaggaaaagcatggcctgcaacctgctgttcttgttcactgggcaaggagt
ctccacaaaacaggttacagtctgaattccttttatgaccaaaaggaatatatggggcgc
tgtgtccactactggaagaaacttttgccacttctagatttggtcaaacagaaaaaaagc
attcctgagccagttgatcctttgttcaagcactttcatagtaaagatattaagctttct
gaagtaaaagacttagaagatgacgcatgccttgcctttgcaacactggatttagttgac
ggaaaaacagaggatgcaataatagcatttgatgctgttaagaacgttgttgcctattgg
aaccttgctttgatataccagcgtaaggccgaagaaattgaaaatgattgtttgccagca
gaagaacaggaagagttccaggagtgcctgcttaagtgcaaaggctatttgaaaatgatt
tgtgatgaatataatgctgatccttccattgcaacattgttgccagttccagttgagact
gtgattgagatgctggagtcagtgaagcagaatcttggagaagcgatggaagatcgtagc
ctgggctttgtggaaaatcattcagcaataaaacattccacaccatcaccctccaagctg
tccatatcgcccagcaaaccaactcggttttctcccaaaacgccaccacgttgggcagaa
gatcaaaaatctctacttgaagtgctctgtaataaagtagaagcattgaagaaagaagtt
caagagctgaaacacaacaattcgaatgcaaacgcttcccctcatagatggcctaatgaa
ggatttgagcctgacagtgttgctgatggctaccaaggaactcaaagtttctatacagtt
cccctaacagtttccacttcaggacctgctgcttactatgcccagtcaccagcttataat
tctcagcatcttctcaggccagcagctaatattactccaacaaagacatctgtgtatgca
atgaacagattgcccccacaacaacatatgtatgcctatcctcaacctatgcatacaccg
ccaactcagcaaagttcagcagcatgtgtatttcctcaagaaatttatggtcctccactg
cgatttgagtctcccgcaactgcaattttgtcaccacataatgaagaattttacaattac
agtgttccaccagccagcacaaatccacccctgccagaacctggctattttactaagcct
tctacagcaatgcagcactccaaacaagaagttccaaaagtgtctgatttggggaaaggt
tgcttaggtcagtcaacatcagaaggtcaaaaaccatctccatttactggaccaatgcag
tctactccagcaccatcaactttcaagtttaactccaactttaaatccaatgatggggat
tttacattttcatcaagtcaagcaggagcgcagccaagtagtgcttatactggcagtgag
agccttttagggcttctgacgtctgatagaccaaccctagagcaagagaaaaaatcttct
agttttgagaaaattgccaatgatgaaaaaagcatgtttagatttggggaaaagagcttt
tcatcaggtttctctataactggaacacaaagtcaagataagaatcctttagtctttggc
cagactgaaaacatttttacttttaagagttctgcaaaatctacatttgcacctccaaca
tttggtgtccaacccaaagatgcacacaacctgagtgtggaatcagatgcaggaagtgaa
catgctgctgctgatgatgatggaccacactttgagcctattgtacctcttcctgaaaaa
attgaagtgagaactggagaagaggatgaagaagaaatgttttgcaatagagcaaaacta
tttagatttgatgcagaaacaaaggaatggaaggaaaggggtattggaaacgtaaaaatt
ttaagacacagggtatctggcaagattcgccttttaatgagacgtgaacaggtgcttaag
atttgtgcaaatcactacataaatgcagatatgaaactgaagccaaatgccacatcagat
aagtcttatgtgtggaatgcttacgactatgctgatgaaatgcccaagccagagcagctt
gctattcgttttaaaactgtagatgaggctgttcttttcaagacaaaatttgaggaggca
caaaggttactagctttgacagagtcccccgtggctccagttcaagaaaaaaatgcaaaa
tataagcagaaggtggattctagcaagccaaatgaaacaccccttacttttggatcacaa
tttgctttgaaaaggggagaatggcagtgtgattgctgccttgctaaaaatgcaccaacg
tccacttcatgtgtgtgctgtcaaacaccaaacaaaaaccagagcagcttaacaagttct
acatgcatatctgcaccatcttttacatttggcaaggaaagtgctactaataagcttgga
tttggtcagcaacttttaaaaaataaagaacaatggacatgtagcaagtgtttgcagaaa
aatgatgccctagtcagcctctgttcctactgccaaacccaaaatcaagcaaagactggc
atttctcaacctaacaaagccagtactggttttacaaacaatgtatctgctcagggtgat
agtttggcagcagtgtttggaaaaaaaccaggtcagtgggattgtgatgcatgttatgtt
agaaatgaaccttcagcaaataaatgtgtttcttgtcaaaatacaaagccattgagtaaa
gctgttgcccaagcagcatctttttcttttgctcctggtgctgataattcacaaaaaaat
tttggtgcccagtttgcaaagaaggaaggacaatgggattgcaattcatgtcttgtcaga
aatgaagcatctgcttcaaactgtgtagcttgccagagtgccaatccgcaggcaacaaat
aaagatgctgtaccacctgcccagaccccatctggcttcaaatttgggccttatgcagag
tttggtaaaacacaaccgagtttatcagctatgttttcacgcaaagagggtcagtgggag
tgcagtacatgcttagttataaacgatgcttcaaaagaaaattgtgctgcttgccagact
gctaaacctggctcatctgccagtcaaagcaaggaggtgccttttacttttggtattaaa
gcaaattcatcacagaattttgggcaacctgttgcgggatttaattgtgatttctctgga
aaagggttcaaatttggtattagtgacgaaaaatcatcagcatcaaactttgcgtttcaa
gcccctgtttccaatgatgaatcaaaggtggtaaaagagggctttaactttccattgtct
gccggtcctcttacttttaattttggaatatctgattcaaataagacaaaggaaatgtct
gctggcttcatgaagggtacttccacaaacgataaagagtctgaaacagctaagactact
acaaaatctgaaaaaagccaacaatgctctgataaagttctaggccagtctgtacagagc
ttttcttttgctgatatcgcaaaaacatctgatacagaaggatttaattttggtaaagta
gaccccaattttaaaggcttttctggtgcagggcaaaaactatttatctctcaaaatgcc
aaaagcaatgaagcagttgcatctaatgagcaggaagctacagatgatctttacaaaact
gaggaacgtgatgacatccattttgaaccaatagtccaacttcctgacaaagtagatctc
gtaacaggagaagaagatgagaaaactctgtattcacaaagggtgaaactgtacaggttc
gatgcaacaagcggacagtggaaagaacgtggagtaggaaatctaaagatccttaaaaat
gatgtcaatggaaaactgagaatgctcatgagaagggagcaagttctgaaagtgtgtgca
aaccactggataacgactacaatgaatctgaagcccttaacaggctctgaccgatcctgg
atgtggatggctaatgatttttctgatggagatgcaaggttagagcagttagctgcaaag
tttaaaacacctgagcaggctgaagattttaagactaagtttgatgagtgtcagcgtctg
ttattagatatccctctacagactcctcataagcttgtagacactggaagaacagctcat
ttgatacaaaaagctgaggaaatgaaaacaggcctaaaagatctaaaaacatttttaaca
gataaagctaaacctttggatgagtcaaatgtgactggctccactgaagtagtgaaacag
tcgcctgcagatggaactgaacccacatttgaatgggacacatatgatatgagaggagaa
gctcttgaagggaatttagatgactctatatatgcctctccactggcaagtagcccagag
aagaagaatttatttcggtttggtgaatcagcatcaggttttaactttagcttccaacca
gagccaagtccctcaaaatctccaacaaaattaaatcatagcagggtgtctgtgggcaca
gatgaggaatctgatgttacccaggaagaagagcgagatggccagtactttgaacctgtt
gttcctttacctgatttgattgaagtaacaagtggggaagaaaatgagcaggcccttttc
tgccatagagcaaaactttacagatttgataaagactcaaatcagtggaaagaaagagga
attggagacttgaagattttacagagattggataataaatctgcccgagttgtcatgaga
agggatcaggtattgaaactctgtgccaatcatcgcataacaacagatataaaccttcaa
ccaatgaaaggggctgaaagagcctgggtatggactgcacatgactttgctgaaggagaa
ggaaagacagaatgttttgctgtacgttttaaactacaggaggctgctgacttgttcaaa
gagggttttgaagaggcaaaagaggcacaagctaaaaactgcttgctcactccattttct
tctcgtggcacatcacccagagctgcttcatgcggaaaagctgcaatagcaatactagag
gaaactacaaaagagagaacagatcagcagcctgaggaagacacttcactgacagaagct
ggcacatcatctcctacagatcagcctgcaaaggccctggtttctcctgcaaaatttaca
tttggatctgatgctgtaaagaatatctttggtagtgagaagaagatgccttttgcattt
ggtaatacatcatccacaaggtcacttttcgggttcagcttcaatgcttctcaagaagaa
gtgcaaaagcagcctcccgaaatcactctggattttacttctaccattgaggctccggag
atgtctgctctacagaaatcatgtcaaggaagtgagcagagtcctatagtttcttcttct
ttgacatcatcatcagtatcatcatcaactcttatgcagcccatgccagccagagataag
gttgatgatgtccctgacgcagatatctcatctgatgtactcattgtatacgaggtgact
cctacccctgagcagaaagccttagcagaaatgctgctcctgccactaacctttttctgc
tacaaaaacaatcctggttatgtcagtgatgagagcgacattgatgatgaggactttgag
actgctgtaaaaaatctaaatggtattttgtatccagaagataagaaagataaggcatca
gcacaactttcaggtcatagcaaggaacctacagctgaatctgaccaggattgtgtaata
gtttgggaaaagaagcccactcctgaagaaaaagccaaagcagacagtctgaagctcccg
ccaacatttttctgtggtttgggtagcgacacagatgaagacaaggataacctagaagac
tttgatacagaagttagaaaagttaaggaggctaaaggagttccagaaaaagatgtaaat
agttcctatgaagctccaatagtgtgtgcagctaaaaccagtgtctccctgcccccaaaa
caagagcctgattccactacaatcatttcccaggagcctgtagacttgtcctcaaaacag
gagctacccaaaacagactccaccagcaaaggattttctgcttctagtttctcctttggg
cttggtacagtttccggagtgtcatttgcagatttagcatcggaaaattctggggattat
gcctttggttctaaagataccagcttccagtgggccaatgctggggcagcagtttttggt
tcttattccaaaagcaaaaagggggaagatgaggatggtagtgatgatgaagtggtacac
agtgatgatgtacactttgagcccattgtatccttaccagaggtggaggtgaaatcaggg
gaagaagatgaggagattcttttcaaagagagagcaaagttgtaccgctgggatagagcg
gtcaatcagtggaaagagagaggagttggtgacataaaaatactttttcataaagagaag
ggatattatcgtgttctgatgcggcgagaccaagtcctgaaagtgtgtgctaatcacgtc
atttcaacagaaataaagattagccccttaaatacatcaaccaattcgctggtatggaca
gcaactgactattcagatggtgaaggtaaagtggaacaattggcagtcagatttaagaca
aaggagttgactgattccttccagagcaaatttgaagaatgccagcagaatttgacagaa
cagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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