KEGG   Xenopus tropicalis (tropical clawed frog): 100135022
Entry
100135022         CDS       T01011                                 
Symbol
ltb
Name
(RefSeq) lymphotoxin-beta
  KO
K03157  lymphotoxin beta (TNF superfamily, member 3)
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100135022 (ltb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100135022 (ltb)
Cytokines and neuropeptides [BR:xtr04052]
 Cytokines
  Tumor necrosis fators
   100135022 (ltb)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 100135022
NCBI-ProteinID: NP_001107163
Xenbase: XB-GENE-494846
UniProt: F6WJ69
Position
8:74390266..74398452
AA seq 177 aa
MRDRSRQKTVIAFNYEGTDGKPQRGKQVNNWQKRNANKSAAHLVGIIHGTNKTLRWKPTH
ELSFIRPSMKYADTNLIVHRDGLYYVYCQVGFYGKVPNIVLFNHVIIQHDSDTVTTLLSG
TESVVGPPPGSSMWYATLAQGGLAKLKSGDHISVIVSHPDLIYDSDGMTFFGLIMVS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgagggacagatcacgtcaaaaaactgtaattgcttttaattatgagggcactgatgga
aaaccacagagaggtaaacaagtaaataactggcaaaagcggaatgccaataaatcagca
gctcatctagttggtatcatacatggtacaaacaagactctgagatggaagccaacacac
gaattgtcctttatccgtccttctatgaaatatgcagacaccaatctgatagtccatcga
gatggtctctattatgtctactgtcaagttggattctatggcaaggtgccaaatattgtg
ctttttaatcacgttattatccagcatgattccgataccgtaactaccctactttcgggc
acagaaagtgttgtgggtcctccaccagggtcctcaatgtggtatgcaacattggcacag
ggagggcttgcaaagctgaagagtggagaccacatttctgtaatagttagccacccagac
cttatatatgacagtgatggcatgactttctttggacttattatggtctcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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