KEGG   Xenopus tropicalis (tropical clawed frog): 100144729
Entry
100144729         CDS       T01011                                 
Symbol
cdh4
Name
(RefSeq) cadherin 4 precursor
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100144729 (cdh4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xtr04515]
    100144729 (cdh4)
Cell adhesion molecules [BR:xtr04515]
 Cadherins
  Major cadherins
   100144729 (cdh4)
SSDB
Motif
Pfam: Cadherin Cadherin_pro Cadherin_3 InlK_D3 He_PIG Big_9
Other DBs
NCBI-GeneID: 100144729
NCBI-ProteinID: NP_001116951
Xenbase: XB-GENE-958013
UniProt: B1H2V0
Position
10:3999689..4338418
AA seq 769 aa
MTGGPGSTPLFLLALSGALSGARSRALGAYDGNASVSRACTPGFSAEGYTALVSPNIMEG
QKLLKVKFTGCSSGARGIWYQTSNPDFKVGADGAVYTARTVRIPAKEAMFTVSAWGHETP
EKWEAAVRLLVEETPLNQSQYGTGIQSRQSEQEQSQSSTLLPWRQHHSGLRRQKRDWVIP
PVNVPENSRGPFPEHLVRIRSDKDRESMIRYSITGVGADQPPMEIFSIDPISGRMYVTRP
LDREERSSYHLRAHAVDMNGNKVENPIDLSIYVIDMNDNRPEFSSPIFNGSVDEVSKPGT
YVMTVTAHDADDINTSNGIVMYRIMAQNPQSPSQDMFVIHSETGVINTVAAGLDREKVQQ
YTVVIQATDMEGNLNHGLSNTATAIITVADVNDNPPEFTNKMFIGEVPENRIDVVVANLT
VVDRDQPYTPNWNAVYKIISGDPAGHFTIKTDPVTNEGIVTVAKPVDYEMNKAFLLNVMV
TNQAPLASGIQMSLQSTAAVTISITDVNEAPYFPNRNEPIRRLEGESPGRLLTTFSAVDP
DRSMQQALRYSKLSDPANWLTINTTNGQVFTTGVLDRESSFVKDDVYQAKFLATDNGVPP
ASGTGTLLIQLIDINDNAPELLPKEAQICERPNGKGINITASDVDRKPSADPFVFELPSV
PSSIRRNWTISRINSNYARLSLHIGYLESGMYEVPVIVTDSGNPPLYNTSVIKVKVCPCD
DNGDCTSVGAVAAAGLGTGAIISILICIIILLSMVLLFVMWMKSRETWG
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgactgggggaccggggagcaccccattattcctactggcactgagtggagctttaagc
ggagcgcggagccgggcattgggggcgtacgatgggaacgcgtccgtatcccgcgcctgc
actccgggcttctccgcggaaggttacaccgcgctcgtgtcgcccaatatcatggaagga
cagaaactgctcaaagtgaagttcaccggctgcagttcgggggcgcggggcatttggtac
caaaccagtaacccggattttaaagtgggcgcagatggggcagtgtacacggcgcgcacg
gtgcggatcccggccaaggaagccatgtttacggtgtctgcttggggccatgaaaccccg
gagaagtgggaagcggccgtccgactcctcgtggaagagacacccctcaaccaaagccaa
tatgggactggaatccagagccgacagtcagaacaagagcagtctcagagtagtactctg
ttaccatggcgacagcatcacagcgggctcagaagacagaagagggattgggtgatacct
cctgttaatgtcccagagaactcgagggggcccttccctgagcacctagtgcggattcgc
tctgacaaagaccgggagagtatgatccgttacagcatcaccggagtcggggcagaccag
ccccccatggagattttcagcatagaccccatttctgggcgtatgtatgtgaccagaccc
ctggaccgggaggagagatcatcgtaccatctcagggcccacgctgtcgatatgaacggg
aacaaggtggagaatcccatcgacctttccatctacgttatcgacatgaacgacaaccga
ccagaattctcaagtcccattttcaatgggtcagtggacgaagtttccaaaccagggact
tatgtcatgacggtgacggcgcacgatgccgacgacatcaacacgtccaatgggatcgtc
atgtaccgcatcatggcccagaacccgcagagtccgtcccaggatatgtttgtgattcac
agcgagacgggcgtcatcaacaccgtggcggctggactggaccgagagaaagtccaacag
tacaccgtcgtcattcaggccactgacatggaagggaatctgaaccacgggctgtccaac
accgccacggccatcatcactgtcgccgatgtcaacgacaaccctccggaattcaccaac
aaaatgttcatcggagaggttccggagaaccgcattgatgtggtggtggccaacctgacc
gtcgtagaccgggaccaaccctacacgcccaactggaacgcggtttataagatcattagt
ggggatccggccggtcactttaccatcaagacagatccggtgaccaatgaaggaattgtt
actgtggcaaagcctgttgactatgaaatgaataaagccttcctgctgaacgtcatggtg
accaaccaagcccctctggccagtggcatccaaatgtccctccagtctacggcagcggtg
accatttctatcaccgacgtgaatgaagcgccttacttccccaaccggaacgagccaatc
aggaggctagagggagagtcgcctggaaggctgctgaccacgttctcagccgtggaccca
gatcgttctatgcaacaagctctcagatactcaaagctttccgacccggccaactggctc
accattaacaccaccaacggtcaggtctttaccacgggcgtattggatcgggagtcttcg
tttgtgaaggacgacgtataccaggccaaatttctggctacggataacggcgtccctcca
gctagcggcaccgggaccctactcatccagctcattgatatcaatgataatgcccccgag
ctgctccccaaagaagcccagatctgcgagcggccgaatggcaaggggatcaacatcacc
gccagcgacgtggaccgcaagccgagcgccgacccttttgtctttgaactgcccagcgtg
ccctccagcatccgccgcaactggaccatcagccggataaacagtaactacgcgcggctc
agcctgcacatcgggtatttggagtccggcatgtatgaggtccccgtcatcgtcacggat
tcgggcaacccccccctctacaacacgtccgtcattaaggtgaaggtttgtccctgtgat
gacaatggggactgcacgagcgttggagccgtggcagcagctggactgggtacaggagca
attatctctatcctcatctgtatcatcatcttgctgtcgatggttttgctgttcgtgatg
tggatgaagagcagggagacctggggatga

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