KEGG   Xenopus tropicalis (tropical clawed frog): 100145810
Entry
100145810         CDS       T01011                                 
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
  KO
K06675  structural maintenance of chromosome 4
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100145810 (smc4)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    100145810 (smc4)
   Condensin II
    100145810 (smc4)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_23 TPR_MLP1_2 AAA_29 THOC7 Crescentin ABC_tran Laminin_II
Other DBs
NCBI-GeneID: 100145810
NCBI-ProteinID: XP_002933283
Xenbase: XB-GENE-5865855
UniProt: A0A8J0QN52
Position
5:complement(114764797..114793406)
AA seq 1286 aa
MPPRKTKTAVAREATESPMDESVSVAQAGQAEAPTQESHNEVVDNRSLEEILSSIPPPPP
PAMTNEAGAPRLMITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF
GYRAQKIRSKKLSVLIHNSDEHKDVQSCTVEVHFQKITDKEGDDFEVIPNSNFYVSRTAY
KDNSSVYHISGKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGM
LEYLEDIIGSQRLKEPIQILCRRVELLNEQRGEKLNRVKMVEKEKDALEGEKNKAIEFLT
VENETFKKKNQLCQYYIHDLQKRSRDMEAQKEKIQEDTKEISEKSNTLLETMKEKNKGLK
DVEKQLNKITKFIEENREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVEEIKN
VPANSQKIITEETNKKDLLEKQKEKEEEKLKDVMDSLKKETQGLQEEKEVKEKELMEISK
TVNEARSKMDVAQSELDIYLSRHNTALSQLNKAKEALNTASATLKERRAAIKELETKLPK
DEVDLKKQEKELESLVSEEANIKNEVRELRHKVEEARSSLSANRSRGKVLDALIQQKKSG
KIPGIFGRLGDLGAIDEKYDVAISSSCGALDHIVVDTIDTAQECVNFLKKQNVGVATFIG
LDKMKVWEKGLDKIQTPENIPRLFDMVKVKDEKIRPAFYFALRDTLVANNLDQATKVAFQ
KDKRWRVVTLQGQIIEQSGTMTGGGGKVMKGRMGSSVMVEISDGQLQIMENKLKTDTDKA
TAIQDRKAHLEEGVAKLRQATREMKNTFEKYTASLQSLSEQEVHLKAQVKELEVNVAAAA
PDKAQQKQMEKNLEALKKEYETVAEKAGKVEAEVKRLHKLIVDINNHKLKAQQDKLDKVN
KEIDECASAITKAQVSIKTADRNLKKSEEAVARTEKEIVENDKTIEELTEDLKQLEEKAT
AVMNECKEAEGSLPEVQEQHRNLLQEIKAIQEKEHALQKEALNIRLNIEQIESHIAEHQS
KIKYWQKEITKISLHRIEDNPEEVLAVLAQEELEAIKDPDQIINQIALLEAKSHEMKPNL
GAIAEYKKKEELYLQRVAELDEITNERDNFRRAYEDLRKQRLNEFMAGFNIITNKLKENY
QMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHY
KPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTHN
TTKSVATNPKIIASKGLAEMHSVGCA
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgccacctagaaagacgaagacggcggtggccagagaggccacagagagccccatggat
gagagcgtcagtgtggcacaggcagggcaagccgaggcacctacacaagaatctcataat
gaggtggttgataatcgaagtttagaagagattttgagtagcatccctcctcccccacct
cctgcaatgaccaatgaagctggagctcctcgtctcatgataacacatattgtaaaccag
aacttcaaatcctatgcaggggaacgcattttggggccttttcataagcgtttttcatgc
ataattgggcccaatggcagtggaaaatcgaatgtgattgattcaatgctctttgttttt
ggatatcgagcacagaagataagatccaaaaagctctctgtgctgatccacaattcagat
gagcacaaagatgttcaaagttgtacagtggaagttcattttcagaagatcacagacaag
gaaggggatgattttgaagtcattccaaatagcaatttctatgtatccagaactgcttat
aaagataattcttccgtctaccacattagtggaaaaaaggcaacctttaaggatgttggg
cttctgctccgaagtcatgggattgacttggatcataataggttcttaatcttgcagggt
gaagttgaacagatagcaatgatgaaaccaaaaggtcaaaccgaacatgatgaaggaatg
ctggaatatttagaagatatcattgggtcgcagaggctgaaggagccgattcaaatactg
tgccgcagagtggagttactaaatgaacaaagaggtgaaaagctaaacagagttaaaatg
gtagaaaaagaaaaggatgcattagaaggagagaaaaataaagcaatagaattccttact
gtggagaatgaaactttcaaaaagaaaaatcagctgtgtcagtactacatacatgacctg
cagaagcgatcacgtgatatggaagcccaaaaagagaagatacaggaagatacaaaagaa
attagtgaaaaaagcaatacgctcttggaaacaatgaaggaaaagaacaaaggacttaaa
gatgtagagaagcaacttaacaaaataacaaagttcattgaagaaaacagagagaagttt
actcagttggacttacaagatgttgacactcgtgagaaactgaaacactcaaaaagcaaa
gttaaaaaactgcaaaaacagcttcaaaaagacaaagaaaaggtggaagaaataaagaat
gtgcctgctaatagccaaaagattattactgaggaaacaaataagaaggatctgctggaa
aagcagaaggagaaagaggaagagaagctaaaagatgttatggatagtcttaagaaggaa
acgcaaggtttgcaagaggaaaaggaggtaaaagaaaaagaactaatggaaataagcaaa
actgtaaatgaggctcgttcaaaaatggatgttgctcagtcagagctggatatatatttg
agccgccataatactgcgctgtcccaacttaataaggcaaaagaggctttaaacacagct
tcagcaactctaaaggaaagaagagcagccataaaagagctagagaccaagctacctaag
gatgaagttgaccttaagaaacaagaaaaagagcttgaaagcctggtttctgaagaagca
aatatcaagaatgaagttcgggagttgaggcataaagtagaagaagcaaggagttcattg
tctgcaaaccgtagcagaggaaaagttcttgatgctttaattcagcagaagaaatcaggg
aaaatacctggaatctttggaagattgggtgatcttggtgctattgatgagaagtatgat
gttgccatttcatcgtcatgtggtgccctcgatcatattgttgttgacacaattgataca
gcccaagaatgtgtaaacttcctgaagaaacaaaatgttggagtagcgactttcattggc
ttggacaagatgaaagtgtgggaaaaaggcctggataaaattcagacacctgaaaatatt
cctcgtttatttgatatggtgaaagtgaaagatgaaaagataagaccagcattttacttt
gcattgcgagataccttagttgcaaataatttagatcaagcaaccaaagtggcatttcag
aaggataaacgatggagagttgtgaccctgcaaggacagattatagagcaatcaggtact
atgactggtggtggtggaaaagtgatgaaaggtagaatggggtcatctgttatggttgaa
atttcagatggtcagttgcaaataatggaaaacaaactgaagactgacactgacaaagct
acagcaattcaagatcgtaaagctcatcttgaagagggagtagccaaactccgtcaggcc
acaagggagatgaaaaatacctttgagaagtatacggccagcctccagagtctttctgaa
caagaggtccatctaaaagctcaggtaaaggagctggaagtcaatgttgctgctgctgcc
ccagataaggcccaacaaaaacagatggaaaaaaaccttgaagctttaaaaaaagaatat
gaaacagttgccgaaaaagctgggaaagtggaagctgaagtgaaaaggctgcacaaactg
atagttgatattaacaatcacaagttgaaagctcagcaagacaaattagataaagtcaat
aaagagattgatgaatgtgcctctgctattacaaaagctcaagtttcaatcaaaacagca
gacagaaaccttaaaaagtcagaggaggcagttgcacgcactgaaaaggaaattgtagag
aatgataaaactatagaggagctaactgaagacttgaaacaactggaggagaaagcaacg
gcagtaatgaatgagtgcaaagaagctgagggctccctcccagaggttcaggaacaacat
cgcaacttgcttcaagaaatcaaagccattcaggaaaaggaacatgcccttcagaaggaa
gcacttaacatcagacttaacattgagcagatagagagtcacatagcagaacatcagtca
aaaattaagtactggcaaaaagagataactaaaataagtctccatagaattgaagacaat
ccagaggaagttcttgctgtattagcacaagaggaattggaagcaattaaagaccctgat
caaataataaaccagattgcacttttggaagcaaaaagtcatgagatgaagccaaacctt
ggagctatagcagagtataagaaaaaagaggaactctatctccaacgagtggctgaactt
gatgaaatcaccaatgaaagggacaattttaggcgtgcatatgaagatcttcgtaaacaa
aggctgaatgaattcatggctggctttaatatcattacaaataagttgaaagaaaattac
caaatgctgacactgggaggagatgctgagctggaattagtagacagtctagacccgttt
tcagaaggcataatgtttagtgtgagacctccaaagaaaagctggaagaaaatatttaac
ctctccggtggtgagaaaactctgagctctttggcgttggtatttgctcttcaccattac
aaaccaacaccactttacttcatggatgaaatcgatgcagccttggacttcaaaaatgta
tccattgtcgcattttacatttatgaacaaaccaaaaatgcccagttcataataatatct
ctgagaaacaacatgtttgagattgcggacagactaatcggaatctataagacacacaat
accacaaagagtgttgccacaaacccaaagataattgcatcaaagggacttgctgagatg
cattcggtgggatgtgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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