KEGG   Xenopus tropicalis (tropical clawed frog): 100151716
Entry
100151716         CDS       T01011                                 
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00270  Cysteine and methionine metabolism
xtr01100  Metabolic pathways
Module
xtr_M00035  Methionine degradation
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    100151716 (dnmt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100151716 (dnmt1)
   03032 DNA replication proteins [BR:xtr03032]
    100151716 (dnmt1)
   03036 Chromosome and associated proteins [BR:xtr03036]
    100151716 (dnmt1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xtr02048]
    100151716 (dnmt1)
Enzymes [BR:xtr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     100151716 (dnmt1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100151716 (dnmt1)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    100151716 (dnmt1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100151716 (dnmt1)
Prokaryotic defense system [BR:xtr02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    100151716 (dnmt1)
SSDB
Motif
Pfam: BAH DNA_methylase DNMT1-RFD DMAP_binding zf-CXXC
Other DBs
NCBI-GeneID: 100151716
NCBI-ProteinID: XP_002934384
Xenbase: XB-GENE-965562
UniProt: F6QE78
Position
3:complement(137106110..137122282)
AA seq 1492 aa
MPAQSASLALPADVRKRLKDLERDQDGMTEKECVQQKLSLVLGFLEADARNKLSDLESKL
SSEELSEEGYLTKVKALLRKQLSCENGDLSLNGETNGCSTNGTCGSDEEDVEMSESNTAG
VKNRKTRKSKTNGENKKSPARARSSRSTTGKQATILSMFSKGSNKRKSSDEEKDTDVSAD
ADQPEEKEKEEKRIKIEVNESENENRSTAEESKKVKPVLPPKTPPPKCMDCRQYLDDPDL
KYFQGDPDDALDEPEMLTDERLSLFEANEDGFESYDDLPQHKVTCFSVYDKRGHLCPFDS
GLIEKNVELYFSGYVKPIYDDNPSLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFA
DYILMDPSEEYSSIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKIETTVPPSGLNFNR
FTEDSLLRHAQFVVEQVESYDEAGDSDEQPVIVTPCMRDLIKLAGVTLGKRRAARRQAIR
HPTKIEKDNKGPTKATTTKLVYQIFDTFFSEQIEKDADKENGIKRRRCGVCEVCQQPDCG
QCKACQDMLKFGGAGRTKQACTQRRCPNLAVKEADEDEEVEDVVPEMPSPKKILQGKKKK
LEKKNRISWVGDPIKTEGKKDFYLKVSIDSEILEVGDCVSVSPDNPTEPLYLARITSMWE
DACGPMFHAHWFCLGTDTVLGATSDPLELFLVDECEDMQLSYIHGKVKVIYKAPSDNWFM
EGGTHTDIKVVEDDGSTYFYQLWYDPEYARFETPPTPQPTEDNKYKFCTSCARLAEIRQR
EMPRVSCPVEDLDSKVCYSTAIKNDVQYKVGDGVLLLPDAFSFSVKLGSPMKRPQKKDDV
DEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIKEIFCNKRSNGKANESDIKLRIYKFYRP
ENTHKGVKASYHSDVNMVYWSDEEAVVDFKAVQGHCTVEYGEDLTETIQEYSAGGSDRFY
FLEAYSAKTKSFEDPPNHARSAVNKGKGKGKGKGKGKTASKSENEQQNCGDKLPKLRTLD
VFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK
TNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYRPKYF
LLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEK
LPMFPEPLHVFAPRACSLSVVVDEKKYVSNITRTNSSLFRTITVRDTMSDLPEIRNGASA
LEISYNGEPQSWFQRQIRGSQYQPILRDHVCKDMSALVAARMRHIPLAPGSDWRDLPNME
VRLSDGTTTRKLRYSHHDKKNGRSSTGALRGVCSCSEGKPCDPADRQFNTLIPWCLPHTG
NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR
LFGNILDKHRQVGNAVPPPLSKAIGSEIKKCVLSREKENGTETVKAEKMETD
NT seq 4479 nt   +upstreamnt  +downstreamnt
atgccggcccagtccgcttccctggctctgcctgccgatgtcaggaaacggctaaaggat
ttggagagggatcaggatggaatgacagaaaaggaatgtgtacaacagaaactgagtttg
gtgcttggcttccttgaagcagatgctagaaacaaactaagtgatctggagagcaagctg
agcagcgaggaactgtctgaggaaggataccttacgaaagtgaaggctcttctgcggaag
cagttgagctgtgaaaatggagacctcagcttaaatggagaaacaaatgggtgctctaca
aatggtacctgcggcagtgatgaggaagatgtggagatgtcagagtccaatactgctgga
gttaaaaatcgcaagactaggaaaagcaaaaccaatggagaaaataagaaatcgccagcc
cgtgcacgctcatcaagaagcactactggcaagcaggccaccatcctctccatgttttct
aaagggtcaaacaagcggaaatccagcgatgaagaaaaagacacagatgtttcggctgat
gcagaccaaccagaagagaaggaaaaggaagagaaaagaataaaaatcgaagttaatgaa
agcgagaacgaaaatcggtctacggctgaagagagtaaaaaggtgaaacctgttctgcca
ccaaaaacaccaccacctaaatgcatggactgcaggcaatatttggatgatccagacctc
aagtactttcagggtgatccagacgacgctctagatgagccagagatgttaacagatgag
cgattatccctttttgaagccaatgaggatgggtttgagagctatgatgaccttccccag
cataaagttacatgcttcagcgtttatgataaaaggggtcatttatgtccttttgactct
ggtctgattgagaagaatgtcgagctgtacttcagcggatatgtaaaaccgatttatgat
gacaacccctctcttgatggtggtgtacgagcaaagaaactgggtcccattaatgcttgg
tggataactggttttgatggaggagaaaaggctttgattggctttacaactgcttttgcg
gactatatcctaatggatcccagtgaagaatacagcagcatctttgctctgatgcaggaa
aagatttacatgagtaagatagttgtagaattccttcagaataaccctgatgtgagttat
gaagatctgctcaacaagattgagactaccgtcccaccttcaggcttaaactttaaccgg
ttcacggaagactctttattaaggcatgcacagtttgtggtggaacaagtggagagctat
gatgaggctggtgatagtgatgagcagcctgttattgtaactccctgcatgagggacctc
ataaagttggctggtgttaccctgggcaaaaggcgagcagcaagaagacaagccattaga
catcctacaaagatagagaaggacaacaaaggaccaacaaaggccactaccacaaaactt
gtgtatcagatctttgacacattcttctcagaacaaatagagaaagatgcagataaggaa
aatggcatcaaacgcaggcgttgtggtgtttgtgaggtgtgtcagcaaccagactgtggc
cagtgcaaagcttgccaggatatgttaaagtttggtggggcaggccgtaccaaacaagcc
tgcacacagagaaggtgtccaaacctggcagtaaaggaagcagatgaagatgaggaagtt
gaggatgttgtaccagaaatgccttcgcccaaaaagatccttcagggaaagaagaaaaaa
ctggagaaaaagaacaggatctcttgggtgggagatccaattaagactgaaggaaaaaaa
gacttttacctgaaagtgtccattgactctgaaatcttggaagttggggattgtgtatca
gtgagtcctgataatccaacagagcctctgtacttggcaaggatcacatccatgtgggag
gatgcctgtgggccaatgttccatgcgcactggttctgcctcggcacagatacagttctt
ggtgcaacatctgatcccctcgagctctttcttgtggatgaatgtgaggacatgcagtta
tcctatattcatggcaaagtgaaggtcatttacaaagcgccatctgacaactggttcatg
gagggaggaacacacactgatataaaggttgtggaggatgatggaagcacttatttttac
cagctgtggtatgatccagaatatgcacgctttgagactcctcccacccctcagcctaca
gaggacaataagtataagttctgcaccagttgtgcccgtctggctgaaataaggcagaga
gagatgcccagagtaagctgtcccgtagaggatttggactctaaagtttgctacagtaca
gctataaagaatgatgtacagtataaggttggagatggagtgctgctccttcctgatgcc
ttctcatttagtgtgaagctgggtagcccaatgaagcgacctcaaaagaaggatgatgtg
gatgaggatctgtacccagaatactaccgtaaatcatcagactacattaagggtagcaac
ctggatgctccagaaccatacagattgggtcgcattaaggagatattctgcaacaagaga
agtaatggaaaggctaatgagtcggatataaagctgaggatttacaagttttacagacct
gaaaatactcacaaaggtgtaaaagcaagctaccattcagacgtaaacatggtttactgg
agcgacgaagaggcagtagtggactttaaggcagtgcaagggcattgtacagtagaatat
ggtgaagacctgactgaaaccattcaggagtactctgctggaggatcagatcgcttttat
ttcctagaggcctatagtgcaaaaaccaaaagctttgaagatccaccaaaccatgctcgc
agtgctgttaacaaaggcaaaggaaagggcaagggaaaaggcaaaggtaaaactgcctca
aagtctgagaatgaacagcaaaattgtggtgataagctgcctaaactgcgcaccctggat
gtgttttctggctgtggagggctctctgaaggctttcaccaagcaggcatatctgagaca
aactgggcaatagagatgtgggagcctgcagcccaagccttcaggctgaacaatcctggt
actacagtattcacagaagactgcaatgttctcctcaaactagtcatgtctggagaaaag
accaattccctagggcagcgcttgcctcaaaagggagatgtggaaatgctgtgcggaggg
cccccctgccaagggtttagtggcatgaacaggtttaactcaagaacctattcaaagttc
aagaactccctggtggtttcatatctcagctactgtgactactacagaccaaaatacttc
ctcttggaaaacgtcaggaactttgtatcattcaaaagatctatggtgcttaagctaaca
ctccgctgccttgtgcgtatgggctaccagtgcacattcggtgttcttcaggctggccag
tatggcgttgcacagacccgcaggagagcaatcgtacttgctgctgctccaggagagaag
cttccaatgttccctgagcctttgcatgtgtttgccccacgtgcttgttcactgagtgtt
gttgtggatgaaaagaaatatgtcagtaacatcacaagaactaactcgagccttttccga
acaatcactgtccgggataccatgtctgaccttccagaaatccgcaatggagcctctgct
ctggaaatttcttacaatggagagcctcagtcctggttccaaaggcagattcgtggctcg
cagtatcagccaattctcagggatcatgtctgcaaggacatgagcgctttagttgctgcc
agaatgcgtcacatacctcttgctcctggctcagactggcgggatctacctaacatggaa
gtgcgtctgtcagatggcactacaaccagaaagttacgctatagtcaccatgacaagaaa
aatgggcgcagcagcactggtgctttaagaggagtctgctcttgttctgaaggcaaacca
tgtgaccctgcagaccggcagttcaacacgctgattccctggtgcctgccccacacagga
aacagacacaatcactgggctggcttgtatggaagacttgagtgggacggcttctttagc
accactgttactaaccctgagccaatgggcaaacagggtcgcgtccttcacccagagcaa
catcgtgtggtgagtgtgagggaatgtgcgcggtcccaaggatttcccgacacctacaga
ctgttcggtaatatcttggataaacacaggcaggtgggtaatgccgtgccgccgcctctt
tcgaaagccattggttcagagataaagaaatgcgttttgtcaagggagaaagagaatgga
acagaaaccgtgaaggctgaaaagatggagaccgattaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system