KEGG   Xenopus tropicalis (tropical clawed frog): 100188921
Entry
100188921         CDS       T01011                                 
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
  KO
K07523  netrin-G1 ligand
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100188921 (lrrc4c)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 I-set Ig_3 LRR_1 ig LRR_9 V-set Ig_2 LRRNT Sp38 LRRCT Syndecan
Other DBs
NCBI-GeneID: 100188921
NCBI-ProteinID: XP_002938986
Xenbase: XB-GENE-5772259
UniProt: F6ZMC6
Position
4:complement(8660458..9311464)
AA seq 639 aa
MLNKMKLHPPQMMIGPRFNRALFDPLFIVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDGISTNTRQLNLHENQIQIIKVDSFKHLRHLEVLQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
EMKRLSYISEGAFEGLSNLKYLNLGMCNLRDIPNLTPLVKLDELDLSGNHLSVLRPGSFQ
GLTHLQKLWIMHSQIQVIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHNLQRIQLHH
NPWNCNCDILWLSWWLKEIVTTGSTCCARCSTPPSLKGTHIAELDHNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTYVSWITPNGTIMTHGSYKVRISVLNDGTLNFTNVTVRD
TGLYTCIVSNSAGNTTASATLNVTASDTGYTYFSTVTVETMEPSQDEARTTETHVGPTPV
IDWETTNATTSLMPQSTRFTEKTVTVPVTDANNGMPGIDEVMKTTKIIIGCFVAITLMAA
VMLVIFYKMRKQHHRKNHHAPTRTVEIINVDDELTADTPIESHLPMPAIEHEHLNHYNSY
KSPFNHTTTVNTINSIHSSVHEPLLIRANSKDNVQETQI
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgttgaacaagatgaaattacatccaccgcagatgatgataggtcctaggttcaacagg
gccctatttgaccccctttttattgtgctgttggctcttcagcttcttgtggtggcgggt
ttagtcagggctcagacctgcccttccgtatgttcttgtagcaaccagttcagcaaggtc
atttgcacaagaagaaacctccgagaggtcccagacggcatctccaccaacacaagacaa
ctgaaccttcatgagaatcagatccagataatcaaagtcgacagttttaaacacttgaga
catctagaagttttacagttgagcagaaaccacattaggacgattgagattggtgctttc
aatggcttggcgaatctgaatacattggagctctttgacaatcgtttgaccactattcct
aatggagcttttgaatatttgtcaaaactgaaagagctttggctgagaaacaatcccatt
gaaagcattccatcctatgcttttaatcgcatcccttctctccgtaggctggatttggga
gagatgaaaagattgtcatatatttcagaaggggcatttgaaggcctttcaaatctcaaa
tatttgaaccttggaatgtgcaacctaagagatatccccaatcttactcctcttgttaaa
ctagacgagttggatctttctgggaaccatttgtcggtccttcgacctggatctttccaa
ggattaacccatcttcaaaaattgtggattatgcattcccaaattcaggtgatcgaaagg
aatgcctttgatgatctccagtcgctggtggaacttaatttggcacataataatctaact
ttactgcctcatgatcttttcacacctcttcacaacctacaaaggattcaattgcatcac
aacccctggaactgcaactgtgacatcctttggctcagttggtggctcaaagagatagtc
accacgggcagcacatgttgtgctcggtgtagcactcccccgagcttaaaaggaactcac
attgcagagctggaccataactattttacttgctacgctcctgtaattgtagagccccct
gctgacctgaatgtcacggaaggcatggcggctgagcttaaatgtagggcatcgacatcg
ttgacttatgttagttggattactccaaatggaactattatgacccatggatcttataaa
gtacgtatttccgtgttgaacgacggcacgctgaactttacaaatgtaacagtgagggac
acgggcttgtacacctgtatagtaagcaattccgccggtaacaccactgcctcagcgaca
ctgaatgtgacggcgtccgacactggttacacttacttttccaccgtgaccgtagagact
atggaaccatctcaggatgaggcaaggaccacagaaactcacgtcggcccaaccccggtc
attgactgggaaaccaccaatgcaaccacctctctaatgcctcagagcacaaggttcaca
gaaaaaaccgtcaccgtccccgtcacagatgcaaacaacgggatgccaggtatcgacgag
gtcatgaaaaccaccaaaataatcattggctgttttgtggccattaccctaatggcggcg
gtgatgctggttattttctacaagatgagaaagcagcaccatcggaagaaccatcacgcc
cctacgcggactgttgaaattatcaacgtggatgacgaactcacggccgacacccccatt
gaaagccacttgcccatgccggcgatagaacacgagcatttaaaccattataactcttat
aagtctccttttaatcacacgacgacggtgaacacaataaattcaatacacagctctgtg
catgaacctttattgattcgagcaaactctaaagacaatgtgcaggaaacgcagatctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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