KEGG   Xenopus tropicalis (tropical clawed frog): 100216252
Entry
100216252         CDS       T01011                                 
Symbol
ogdh
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial
  KO
K00164  2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00020  Citrate cycle (TCA cycle)
xtr00785  Lipoic acid metabolism
xtr01100  Metabolic pathways
xtr01200  Carbon metabolism
xtr01210  2-Oxocarboxylic acid metabolism
Module
xtr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xtr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    100216252 (ogdh)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    100216252 (ogdh)
Enzymes [BR:xtr01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.4  With a disulfide as acceptor
    1.2.4.2  oxoglutarate dehydrogenase (succinyl-transferring)
     100216252 (ogdh)
SSDB
Motif
Pfam: E1_dh OxoGdeHyase_C Transket_pyr 2-oxogl_dehyd_N GGA_N-GAT R2K_2
Other DBs
NCBI-GeneID: 100216252
NCBI-ProteinID: NP_001135687
Xenbase: XB-GENE-1010761
UniProt: F6Z470
Position
3:complement(126356124..126385122)
AA seq 1018 aa
MFNLRTCASKLRPLTASQTVRSLKHSRPAAPRTFQQFRCLSTPVAAEPFLSGTSSNYVEE
MYYAWLENPKSVHKSWDIFFRNANAGASPGAAYQSPPPLGSSLSTLTQAQSLVQAQPNID
KLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISSVNFDGAPVIVGSPNMGFYGLQESDLDK
VFHLPTTTFIGGNEMALPLREIIRRLETAYCQHIGVEFMFINDLEQCQWIRQKFETPGIM
QFNNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEGLIPALKTIIDKSSENGVDY
VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR
NITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETF
HLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVM
YVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKTVLQKYAETL
ISQGVVNQPEYEEEISKYDKICEEAFARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMSC
PSTGLSEEVLTHIGTVASSVPVEDFTIHGGLSRILKGRGEMVKNRSVDWALAEYMALGSL
LKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYG
VLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGME
GMGPEHSSARPERFLQMCNDDPDVWPKVSEDIAVRQLYDCNWIVVNCSTPASFFHVIRRQ
ILLPFRKPLIVFTPKSLLRHPEARSSFDEMLPGTHFERIIPDAGPASQNPEQVKRLIFCT
GKVYYELNKERSSRGMDGDVAITRVEQLSPFPFDLVEKEVQKYPNAELIWCQEEHKNQGY
YDYVKPRIRTTIHRAKPVWYAGRDPAAAPATGNKKTHMTELRRFLDTAFNLDSFKGHS
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgtttaacctaaggacttgtgcctctaaactccggcctttgacggcctcccagactgta
cgatcccttaaacacagcaggcctgcggcccccaggacgtttcagcagttcaggtgtctt
agtacacctgtggccgcagagccttttctaagtgggactagctccaactatgtggaggaa
atgtactatgcttggctagaaaaccctaagagtgtccacaagtcatgggacatctttttc
cgcaacgcaaatgctggcgcatcccctggtgcagcttaccagagcccgcctcctctcggc
agcagcttgtccacccttacccaggcccagtcgttggtgcaggcccaacctaatatagac
aagcttgtggaggatcatctcgctgtgcagtcgctcatccgtgcttatcaggtgaggggt
catcacattgcaaagcttgacccgcttggaattagttctgttaattttgatggggctccg
gtgatagtcggatctccaaatatgggcttttatgggctgcaggaatctgacctggataaa
gtcttccatctcccaaccactacattcatcggcggcaatgaaatggctctgcccctgaga
gagatcattcgaaggctggagactgcatactgccagcacatcggagtcgaattcatgttt
ataaatgatctggagcagtgtcagtggataaggcagaagtttgagaccccaggaatcatg
cagtttaacaatgaagagaaaaggaccctgcttgccaggctggttagatctactcggttt
gaagagtttctccatcgcaagtggtcgtctgagaagcgctttggtttggaggggtgcgag
ggcttgatccctgctctgaaaaccatcattgataaatctagtgagaatggggtggattat
gtcatcatggggatgccccacaggggccgactaaacgtactggccaatgtgattaggaaa
gagttggagcagattttctgtcagtttgattccaaactggaagctgcagatgagggctcc
ggagatgttaaataccacctgggaatgtatcacaggaggataaacagagtgactgacagg
aacatcaccttgtccttggtggccaacccctcccatctggaggcagcagatcctgtggtc
cagggaaagacgaaagctgagcagttctactgtggggacacggagggcaaaaaggtgatg
tccatcctgttgcatggtgatgctgcattcgcaggacagggcattgtgtatgagaccttc
caccttagtgaccttccctcctacactacacatggcactgtgcatgtggtggtgaacaat
cagattggtttcaccactgaccctcgaatggcccgctcctctccctacccaacggatgtg
gccagagtggtgaatgcccccatcttccatgtcaacgcagatgaccccgaagctgtgatg
tacgtgtgtaatgtggctgcagagtggcgaagcaccttccacaaggatgtcgtggtggat
ctggtgtgttaccgtaggaacggtcacaatgagatggatgagcccatgttcacccagccg
ctgatgtacaaacagattcggaagcagaagactgtactgcagaagtacgcagagacccta
atctctcagggagtggtcaaccagccggagtatgaggaagaaatttcaaaatatgacaaa
atttgtgaggaggcttttgcccgatctaaagatgaaaagatccttcatatcaagcactgg
ctggactccccctggcccggctttttcaccctggacggccagccccgcagcatgtcctgt
ccttctactgggctcagtgaggaggtcctgacgcacattgggactgtggccagctccgtg
ccagtggaggatttcacaatccatggaggtctcagccgtatactcaaaggtcgtggagag
atggtaaagaacaggagtgtggactgggctctggcagagtacatggcattaggttccttg
cttaaagaaggcattcacatccgactgagtgggcaggatgtagagagaggcaccttcagt
caccgccaccatgtcttgcatgaccaaaatgtggacaagaggacatgcatcccaatgaac
cacctgtggcctaaccaggctccttacactgtttgcaacagctcattgtctgaatatggt
gtgcttggttttgagctgggatttgccatggcgagcccaaatgccttggttttgtgggag
gcccagtttggagatttccacaacacggctcaatgtatcatcgaccagtttgtttgtcca
ggtcaagccaagtgggtgcggcagaatggaattgttttgctgctgccacatggtatggag
ggcatgggtccagaacattcctctgccagaccggaacgtttcttgcagatgtgtaacgat
gaccccgatgtgtggccgaaagtttctgaagacattgctgttcgccagctttacgactgc
aactggattgttgtcaactgctccactccggccagtttcttccatgtgatccgcaggcag
atcctgttgcccttccgcaaaccgctgattgtcttcactcccaagtccctcctgcgccac
cctgaagctaggtcaagttttgatgaaatgttgcctggcactcattttgagagaattatc
ccggatgctgggcctgcttcccagaaccctgagcaggtgaagcgcttgattttctgcaca
gggaaggtgtactatgaactcaataaagagcgctcaagtcgtggtatggatggggatgtg
gccatcactcgtgttgagcagttgtctccattcccgttcgaccttgtggagaaggaagtg
cagaaataccccaatgctgaactgatctggtgccaggaagagcacaagaaccagggttat
tacgactatgtgaaacccaggatacgcaccacaattcaccgtgctaaacctgtctggtat
gctgggcgcgaccctgccgccgctcctgccacgggcaacaagaaaacccacatgacagaa
ctcagacgtttccttgatactgcgttcaacctggattccttcaagggccactcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (5)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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