KEGG   Xenopus tropicalis (tropical clawed frog): 100216285
Entry
100216285         CDS       T01011                                 
Symbol
trpt1
Name
(RefSeq) tRNA 2'-phosphotransferase 1 isoform X1
  KO
K10669  2'-phosphotransferase [EC:2.7.1.160]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xtr03016]
    100216285 (trpt1)
Enzymes [BR:xtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.160  2'-phosphotransferase
     100216285 (trpt1)
Transfer RNA biogenesis [BR:xtr03016]
 Eukaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    100216285 (trpt1)
SSDB
Motif
Pfam: PTS_2-RNA
Other DBs
NCBI-GeneID: 100216285
NCBI-ProteinID: XP_002940273
Xenbase: XB-GENE-994188
UniProt: F7C4I0
Position
4:35626027..35640886
AA seq 228 aa
MDRSNPSSRRRGSHGKKQDPDVHLSKCLSYALRHGAVNLGLPMGTDGFVPVSSLLLLPQF
RTFSQVDIERVVSCNDKQRFTLRYSYADGALEIRANQGHSLQVEVELTPLGEELPNQAIH
GTYFRHWPSIQQRGLSRMNRTHIHLCTELPGEGQECISGMRRDCEVAIFIDLPKAVADGL
LFFWSSNRVLLTPGNADGLLLPKYFLRALQLRPQRQMIPLEYSRDKET
NT seq 687 nt   +upstreamnt  +downstreamnt
atggacagatcaaaccctagcagtagaagaagaggttctcatgggaaaaagcaggaccca
gatgtgcatttatcaaaatgtctgtcatacgcattgagacatggcgctgttaatctagga
cttcccatgggaacagatggctttgtccctgtctcctctcttctccttctacctcagttt
cgcaccttttcccaggttgacattgaacgtgtggtaagctgcaatgacaaacagcgcttt
acattacgctattcttatgctgatggtgccctggaaattcgagccaatcaaggccactcc
ttacaggtggaagttgaactgacaccacttggggaagagcttcccaatcaagccattcat
ggtacctacttccgtcactggccttcaatccaacagcgcggcctttctcggatgaatcgt
actcatatccacctctgcactgagctcccaggtgaaggacaagagtgtatcagtggaatg
cgcagggactgtgaagtggccatattcatagaccttccaaaagctgtggcagatggactt
cttttcttttggtcttcaaaccgtgtccttctcacaccagggaatgcagatggtctgctt
ctcccaaaatatttcctgcgagccctgcagcttcgacctcaaagacaaatgattccactt
gaatattcaagagacaaagaaacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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