KEGG   Xenopus tropicalis (tropical clawed frog): 100485224
Entry
100485224         CDS       T01011                                 
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
  KO
K15363  fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100485224 (fan1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100485224 (fan1)
Enzymes [BR:xtr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.1  phosphodiesterase I
     100485224 (fan1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100485224 (fan1)
SSDB
Motif
Pfam: FAN1_TPR VRR_NUC Fan1_SAP FAN1_HTH zf-TRAF
Other DBs
NCBI-GeneID: 100485224
NCBI-ProteinID: XP_002934961
Xenbase: XB-GENE-1011796
UniProt: A0A8J0QQA9
Position
3:complement(97014276..97029116)
AA seq 1037 aa
MPWIVTGDEQCIQRLSQSIYPSTSEMNSPEKKKSRRSLSISKKKPNVNLKNIQSPRKTSV
SPSIIALFKNAPPAKLSCPLCAEMVPRFGLNKHLDETCQKAKQCADDVILIEEQDSMQSE
QCQSTRPLENIRNPVSKTSPSKNNEKQTSSYFNKCSPVKELHKETEMQIIKTVPLGSLSS
KLSRRRQVREMKQEMQENNKDATGCCESLSEDLSVLTGDQPKNNDISSLTFVSKCEKKTD
PTDTKRLTAKYHNQSDVKKDTGAEQYSHHLDECLIPTSSSVKSMFLGPTGRKQVDKDTKA
KRHNSEKENTACKRAKHCDLTAETFEPALAKIYDAKDGWSNEMEDKSILDEFLKPFNDPD
SQEQVDSLQNGMDANIPQESSPQSLSIPYYQRNFLMVLQTVMESEEDMSLFSEEDIHILR
TFYELSGGGQKLYVRLFQRKLNWLKINKIEYPEIASDLVPFIEELVRNGFLQSDSELQEL
SEALDLLSAPELKLLAKAFHLANPNAQKQQLAEELLRLSKQRSVFSLGKKQPGIAAVILK
KAKEITGRAVRVCKGPRGVFSRVLLLFSLTESMDVEEAASGGQTQLSTVLMVNMGRMTFP
EYTVQRSTRIFNDREDLIRYESAMHKLVDVAVAMTSGQWEEAHLLYQLTQKEWDELKDDP
SLRNHEKLPEYLRCFTVGWIYTKILSRGVEILQRLHLYKEAVELLRCLLSQKVYCPDSRG
RWWDRLALNLHQHLKRTQEAIGAILEGLSDPHVRTGHQLSLYQRAVRMRDSPSCKKFRQM
FCDLPLIEVEDVPHVTIKGKMYPQTGMGKSVFIMEELSEEVGANVTLSKVMCSVEELSLA
HYRQQGFDQGIHGEGSTFFTLYGLLLWDIIFMEGIPDVFRNSYQAFPLDLYTDSFYENRR
EAIECRLQLLQECSTETLSQLIADVWNAHEGKVAALVNWERFSSLQQAQSLVSCLGGAFL
SGVCKKMSRDIRHCKGGLPDLVVWNGQTKQYKLVEVKGPNDRLSHKQIIWLHELQKLGAS
VEVCHVVSIGAKSNRVA
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgccttggattgtgacaggagatgaacaatgcattcagaggcttagtcaaagtatatat
cccagtacatcagaaatgaattctcctgaaaagaaaaaatcccgcagaagtctatccata
tcaaaaaaaaaacctaatgtcaatttaaaaaacattcagtcaccaagaaaaacatcagtg
tctccatcaattattgccctatttaaaaatgcacctcctgcaaagctctcttgccctctt
tgtgctgaaatggtgccacgatttggccttaacaaacacctggatgaaacatgccaaaaa
gcaaagcaatgtgctgacgatgtcatactgattgaagaacaggattccatgcagtcagaa
caatgtcaaagcacccgaccattagaaaacatcagaaatccagtctctaagactagtcct
tctaaaaataatgagaaacaaacaagctcatattttaacaaatgcagccctgtaaaggaa
cttcacaaagaaacagaaatgcagattattaaaacagtgccactgggaagtctttcctcc
aaactctctagaagacgacaagtacgtgaaatgaagcaggaaatgcaagaaaataacaaa
gatgccactggttgctgtgaatctttaagtgaagacctttctgttttaacaggtgatcaa
cctaaaaataatgatattagcagccttacttttgtttctaagtgtgaaaaaaagacagac
cctactgacacaaagagattgactgcaaaataccacaatcagagtgatgttaaaaaggac
actggtgcagagcaatatagtcaccatctggatgaatgcctaattcctacatcaagcagt
gttaaatccatgtttcttggaccgacgggtagaaagcaagttgataaagatacaaaagct
aaaaggcacaattcagaaaaagaaaatacagcttgtaaaagagcaaaacattgtgatctt
actgcagaaacatttgaacctgctttggcaaaaatatatgatgctaaagatggctggtct
aatgaaatggaagataaaagtatactagatgaatttttaaaaccttttaatgatccagat
agccaagagcaagtagatagtttgcaaaatggaatggatgctaacattccacaggaatct
tcaccccaatccttgagcatcccgtattatcagcgaaactttctaatggttcttcagaca
gttatggagagtgaagaagatatgagtctcttcagtgaagaagatatacacatcttaaga
acattttatgaactttcaggtggtgggcaaaagctatatgtgcgtttatttcaacggaag
ctgaactggctgaagataaacaaaattgagtatccagagatcgcctcagatttggttcca
tttattgaagagctggtccgaaatgggtttcttcagtcagactctgagttacaagaactc
tcagaagcactggatcttctctcagctccagaactgaagttgttagcaaaagcctttcac
ttggcaaatccaaatgcgcaaaagcaacagctcgctgaggaacttctgcgattatcaaaa
caacgcagtgtattcagtcttggcaaaaagcaacctggtattgctgcagtaattctaaaa
aaggctaaagagattacaggacgagctgtgcgggtttgtaaaggtccaagaggggtgttt
tctagagtccttctccttttctctttgactgagtctatggatgttgaagaagctgctagt
ggaggacaaactcagctctctacagttctcatggtgaacatgggacgtatgacatttcct
gaatatactgtacaaagaagcacccgaatttttaatgaccgagaagatcttatccggtat
gagtctgcaatgcacaagctagtagatgtagcagtagccatgactagtggtcagtgggaa
gaagcacacctcctctatcagcttacccagaaggaatgggatgaactgaaagatgaccca
tcattaaggaaccatgaaaaattgccagagtatctccgctgctttactgttggctggata
tataccaaaatcttatcacgaggagtagagatcctgcaacgactccacctctataaggaa
gctgtagagctgctgcgatgccttttgtctcagaaagtttactgtcctgacagcagaggg
cgctggtgggatcgtctggctctaaacttgcatcagcatttgaaacgcacacaggaggca
attggtgccatcctagagggtttatcagatcctcacgtgcgcactggtcaccagctttcc
ctgtaccaacgtgctgtccgtatgagagactcgcccagctgcaaaaaattccgccagatg
ttctgtgacctgcctcttattgaagtggaggatgtacctcatgtcaccatcaaaggcaaa
atgtatcctcaaacaggaatgggcaaatctgtatttataatggaagagctgtctgaagaa
gttggagcaaatgtcactctttctaaggtgatgtgttcagttgaggagctgtccctcgcc
cattacaggcagcagggctttgatcaaggaattcatggagaaggctccacattcttcaca
ctttatggtttgcttttgtgggacatcatcttcatggaaggaattccagatgttttcaga
aattcctaccaggccttccctttggatctgtacacggatagcttttatgagaacagaaga
gaagctattgagtgccggctccagctgctccaggaatgctccacagagaccctgtcccag
ctgattgctgatgtttggaatgctcatgagggcaaagtggcagcattagttaactgggag
cgcttctcatctcttcagcaagcccagagtttggtgtcttgcctcgggggggcattttta
agtggagtatgcaagaagatgtccagagatatcagacactgcaaaggagggctccctgat
ttggttgtatggaatggacagacaaaacagtacaagctggtggaagtgaaaggccccaat
gatcggctgtcacacaagcagatcatttggttacatgaactgcagaagctgggagccagt
gtggaagtttgccatgttgtttcaattggagccaaaagcaaccgagttgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system