KEGG   Xenopus tropicalis (western clawed frog): 100485665Help
Entry
100485665         CDS       T01011                                 

Definition
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC100485665
  KO
K11253  histone H3
Organism
xtr  Xenopus tropicalis (western clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100485665
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100485665
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100485665
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100485665
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Histone CENP-T_C CENP-S CBFD_NFYB_HMF TAF TFIID-31kDa Bromo_TP PAF
Motif
Other DBs
NCBI-GeneID: 100485665
NCBI-ProteinID: XP_031749188
Position
9
AA seq 430 aa AA seqDB search
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRQLPTALEVRGGPSIXFIMARTKQT
ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
FQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL
ARRIRGERAXIIGSFSPSSTKALFRATKSAIKRAETFISTVQIATPTAPNKLTPPIRLEF
SLRSSPAAYKAVGQAGNHISFVEALVRMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKP
AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR
QGRTLYGFGG
NT seq 1293 nt NT seq  +upstreamnt  +downstreamnt
atgtctggacgcggcaaaggcgggaagggtttggggaaaggaggcgccaagcggcacagg
aaggtgctgcgggataacatccagggcatcaccaagcccgccatccgccgcctggcacgg
agagggggagtcaagcgcatctctggcctcatctatgaggagactcggggggtcctcaag
gttttcctggagaatgtcatccgggacgccgtcacctacaccgagcacgccaagaggaag
accgttaccgccatggatgtggtgtacgctctcaagcgccagggccgacagctgcccaca
gcacttgaagtcaggggcgggcccagcatctgattcataatggcccgtaccaagcagacc
gcccgtaagtctacaggagggaaagctccccgcaagcagctggcaaccaaagcagccagg
aagagcgctccggccaccggtggagtgaagaaacctcaccgttaccggcccggcacagtt
gctctccgtgagatccgccgctaccagaaatccaccgagctgctcatccgcaagctgcct
ttccagcgcctggtccgggagatcgctcaggacttcaagaccgacctgcgcttccagagc
tcagccgtcatggctctgcaggaggccagcgaggcttatctggtcggtctctttgaggac
accaacctgtgcgccatccacgccaagagggtcaccatcatgcccaaggacatccagctg
gcccgcaggatccgaggcgagagggcttagatcatcggcagcttctctcccagcagcaca
aaggctcttttcagagccaccaaatccgcaatcaaacgagctgagacttttatctctact
gtccaaattgcaactcccacggccccgaataagttgactccgcccatacgccttgagttc
tctctcaggtcctctccagctgcatataaggcggtgggacaggctggtaatcacatttct
ttcgtggaagctttagtgagaatgtctggacgcggtaaaggcgggaagggcttggggaaa
ggaggcgccaagcggcacaggaaggtgctgcgggataacatccagggcatcaccaagccc
gccatccgccgcctggcacggagagggggagtcaagcgcatctctggcctcatctatgag
gagactcggggggtcctcaaggttttcctggagaatgtcatccgggacgccgtcacctac
accgagcacgccaagaggaagaccgttaccgccatggatgtggtgtacgctctcaagcgc
cagggccgcactctctacggcttcgggggctga

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