KEGG T01011: 100485825

Xenopus tropicalis (tropical clawed frog): 100485825

Entry

100485825         CDS       T01011

Symbol

apba1

Name

(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X2

K04531

amyloid beta A4 precursor protein-binding family A member 1

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100485825 (apba1)
Membrane trafficking [BR:xtr04131]
Exocytosis
  Calcium ion-dependent exocytosis
   Others
    100485825 (apba1)
Endocytosis
  Clathrin-mediated endocytosis
   LDLR adaptor proteins
    100485825 (apba1)

SSDB

Motif

Pfam:

PID PDZ PDZ_6 PDZ_2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

1:complement(129509040..129601734)

AA seq 903 aa
MRYLQDSSLSPSAAPRLPTKLTSPHHHHTHKQAASVLDPTVQALGYPLRVTSLESCGQRA
FGAEQRCLYYKTYCCEPAMNHLEGSQEVEVSDEPGSADINESVEADLEHPEVEEEQHQFV
PPNLRQVSEEQEGQSGQEEDGTLARSASTESGFHNHTDTAEGDVIAVQADGYDVDRIQEN
DDESAYAIQYRPESEEYTENAEAEHGEALHNRTLPNHLHFHGLDQEEALNAAYSGYVYTH
RLFHRGEDEQYAEPYADYGLQEHVYEEIGDTPELDIREGLRLYEQEREEADNYRKEALGA
RLHHYDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIVAEVKQSMSSQSLDKVAEDM
PEAEQNLDIVEPSKLGGGSHVTNGNLSSCSKTSTSTGEVQRYSKEKRDAISLAIKDIKEA
IEEVKTRTVRSPYTPDEPKEPIWVMRQDISPTKDCDDQRPLGGDSPSPDSSSPQGAESTN
RQNHQNACDAAESSSNKESRKSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSD
KTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAAEGEAQPMTEVDLFISTQRIKVLNADTQ
ETMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQDSVEASHPSQDGKRQYKMICHVFES
EDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENC
KDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLSIGDQIMSINGTSL
VGLPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRG
GIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQP
VYI

NT seq 2712 nt +upstreamnt +downstreamnt
atgagatacctccaggactcaagcctctctcccagtgctgctccacgtctgcctactaag
ctcacctccccccaccaccaccacacacacaagcaggcagcctctgtgctggaccctact
gtgcaggcactgggatatccactgagggtgacaagtctggagagctgtggccagagggct
ttcggtgcagaacaaagatgtttatactataagacttactgctgtgaaccagccatgaac
catttagagggatcgcaagaggtagaggtgagtgatgagcctggaagtgcagacattaat
gagtctgtggaagctgaccttgagcacccagaagtcgaagaagaacaacaccagtttgtt
ccccctaacttgcggcaggtatctgaagagcaggagggacaatctggacaagaggaagat
ggcactcttgcccgatctgcaagcacagagagtggttttcacaaccacacagatacagct
gagggggatgtgattgcagtacaggcagatggatatgatgtggaccgaatccaggagaat
gatgatgagagtgcctatgctattcagtacaggccagagtctgaagagtacactgagaat
gcagaggcagaacatggggaagctctgcacaaccgaactcttcctaatcacttacacttc
catggtctagatcaggaggaagctctaaatgcggcctactctggatatgtctacacccat
aggctatttcataggggagaggatgagcaatatgcggaaccttatgcagattatggactg
caagagcatgtgtatgaggaaataggcgacactcctgaactagatattagggagggcctc
agactttatgagcaggaaagagaggaagctgacaactatcggaaggaagcacttggtgca
cgccttcaccattatgatgaacgttctgatggggagtctgacagccctgagaaagaagca
gaattcgcaccgtacccaagaatggacagttatgagcaagaggaagatattgatcagatt
gtggcagaggtcaaacaaagcatgagttctcaaagtctggacaaagtggcagaggacatg
ccagaagcagaacaaaatctggacatagtagaaccttccaaattgggaggtggaagccat
gtgactaatggaaatctgtcatcttgttccaaaacatctacaagtacaggagaggtacag
aggtatagcaaggaaaagagggatgccatctcactagccattaaggacattaaggaggca
attgaagaagtaaagacaaggacagtccgttccccatatactcctgatgagccaaaggaa
cctatctgggtgatgaggcaagacattagtccaacaaaggactgtgatgaccaaaggcca
ctaggtggagattctccatctccagattcttcgtcaccccagggggctgaatcaacaaat
cggcaaaatcatcaaaatgcgtgtgatgcagcagaatcatcttcaaacaaggagtcaagg
aagagcttggcttcattcccaacctacgttgaagtccccggaccctgtgatccagaagac
ctaattgatggaattatttttgctgccaattacctcggctctacacaactactttctgac
aagaccccatctaagaatgtgcgtatgatgcaagcacaggaagctgtcagtcggattaag
atggcccagaaattagccaaaagcagaaagaaggctgcagaaggggaggcacaacccatg
accgaagtggacctctttatttctacgcaaaggataaaagtattgaatgcggacacccag
gaaacaatgatggatcatcctttgcggaccatttcttacattgcagatattggcaatatc
gtagtcctcatggcacgtaggcgcatgccacgctccaactcacaagacagtgtggaggcc
tctcacccttctcaagatggaaagcggcaatacaagatgatctgccatgtttttgaatct
gaagatgcacagctaattgctcagtccataggccaggctttcagtgtggcttaccaggag
ttcctgagggcaaatggtattaacccagaagatctgagccagaaggaatacagcgacctg
ctcaacactcaggacatgtataatgatgatctcatccacttctctaagtcagagaactgc
aaagatgtttttattgaaaagcaaaaaggggaaatccttggagtggtgattgtggaatct
ggctggggatccatcttgcccacagttataatcgctaatatgatgcatggagggccagct
gagaaatcaggaaagctgagtattggagatcagatcatgtcaatcaatggcaccagcttg
gttggcctgccactgtctacctgtcaaagcatcatcaagggattgaaaaaccagtcccgt
gtgaagttgaacattgtgaggtgccccccagttaccacagtcttaatcaggaggcctgac
ctacgatatcagcttggcttcagtgtacagaatggcattatctgcagccttatgcgaggt
ggcatagcagagcgaggaggagtgagagtcggacatcgcatcattgagatcaacggacaa
agtgttgtagcaactccccatgagaagatagttcatattctttccaatgcagttggtgag
atacatatgaagacgatgccagcagcaatgtaccgactgctgactgcacaagagcaacca
gtttacatctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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