KEGG   Xenopus tropicalis (tropical clawed frog): 100486199
Entry
100486199         CDS       T01011                                 
Symbol
sptbn2
Name
(RefSeq) spectrin beta chain, non-erythrocytic 2 isoform X1
  KO
K23932  spectrin beta, non-erythrocytic 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100486199 (sptbn2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    100486199 (sptbn2)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     100486199 (sptbn2)
  Intermediate filaments
   Intermediate filament-binding proteins
    100486199 (sptbn2)
SSDB
Motif
Pfam: Spectrin CH PH_9 PH PH_11
Other DBs
NCBI-GeneID: 100486199
NCBI-ProteinID: XP_002940551
Xenbase: XB-GENE-1008690
UniProt: A0A6I8R4I5
Position
4:39033742..39131168
AA seq 2406 aa
MFQFDSPAYEDVPRPASPGPRLASPVPRSGSPLLSPAAFVNAVQYANVLEGRFKQLQDER
EAVQKKTFTKWVNSHLARVTCRISDLYNDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHC
LENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEK
KSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDIIDFDTLKKSNAHH
NLQNAFNVAERELGLTKLLDPEDVNVDQPDEKSIITYVATFYHYFSKMKALAVEGKRIGK
VLDQAIEADQLIENYEGLASELLQWIEQMIITLNDRKLANSLSGVQNQLQAFNTYRTVEK
PPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAEHERELALRN
ELIRQEKLEQLAARFDRKAAMRETWLSENQRLVAQDNFGVDLTAVEAALRKHEAIETDIL
AYSERVQAVNAVADELEAENYHDVRRILARKCNVIRLSDYLRELVTARRQRLHMNLELQR
MFQDLHYLMDWTEDMKGRLQSEDYGKHLHGVEDLLQTHTLVEADIAVQAERVKSVTAVAQ
KFMTEDEGYKPCDPELVRNRVHLLEQRYAELCNLSAARRSKLEESRRLWKFFWDMGEEEA
WIREQSRLLLSDDYGKDLTSSLRLISKHNAFRGEMSGHRGPLQQTVAEGEELISKGHFGA
GEIEERIKEVKGQWTEMEALAEDRERRLREAYSYYQFQADANDAEAWILDTLRLVSTSEV
GHDEYSTQTLVKKHKEIEEEILSHRPAIDALHEQARGLPPAYSHSPEVDGRLPALEQRYE
ELVALAAHRKQALQDSLALHKMFSEADACLLWIDEKEQWLNVTEIPEKLEDLEVVQQRFE
TLEAEMNNLASRIASVNEVAGQLLTTDQRNENSIRDMQDQLNSRWNEFRKLVDQKKGALD
SALDIQNYHLECNETVCWMREKTKVIESTQSLGNDLAGVTALQRKLTGMERDLKAIQGKV
GDLRSEAEKLADGHPQKAPAIIGRLSDIDETWGELKDTMKRREETLGEASKLQGFLRDLD
DFQSWLSRAQTAVASEDVPADLAEAERLLAQHEGIKNEIDHYGADYHRVRDVGEEVTRGQ
TDAQYMFLQQRLKALDTGWNELGQMWENRHQLLSQGHSFQQFLKDTKQVEGFLNNQEYVL
SHTEMPSTLQAAEAAIKRHEDFLTTMDANEEKIQGLVESGRKLIEEQNVNSEKIQEKVTS
IDERHKKNQKTASEVLTRLKDNRDLQHFLQDCQELTLWINEKMLTAQDVSYDEARNLHSK
WQKHQAFMAELASNKDWLDKIDKEGQQLMSEKPELEPVVREKLDTLHKLWNDLESTTQSK
AQCLFDANRAELFTQSCSALESWLQNLESQLQSDHYGKDLTSVNILLNKQQMLENQMEVR
EKELEAIQSQAQALGQEDANIVEVDSKHKDVADKFSKLRAPLNKRRKLLLASKEGHQFNR
DLEDEILWVKEKMPMAISTDHGKDLPTVQLLIKKNQTLQKEILGHQPRIDDILERGKSMI
QDSSLDPQEIEERLGLLKSTWEELAAEGGKRHARLEESLAAQQFYADAAEAEAWMGEQEL
HMMSEEKAKDEIGAQAMLKKHLVMEQALDDYADNIHQLANSSRDMVSRGHPESDRITLRQ
GQVDKLYASLKDLAEERQGKLQEHHRLCQLKRDVEDLEHWISEREVVAASHELGQDYEHV
TMLRDKFREFSRDTSNIGQERVDAVNLMADDLISSGHSENATVADWKDQLNEAWADLLEM
IDTRSQMLAASYELHRFYQDAKETLGQIQDKQKQIPEETGRDLNTAEAMQRMHTAFEHDI
QALSAQVKQVQEDASRLQKAYAGEKAADIHRHEQAVSEAWGELQNASGARRQLLLDTVEK
FRFFRMVRDLMLWMDDINLLIDAQEKPRDVSSADLVIQNHLGIKAEVDARADSFTTCIDL
GNSLLEKNHYASDKISEKLEQLQERRQETENKWKDKMAWLRVVHEVLMFGRDASVAEAWL
ASQEPIVRSSELGGNVDEVESLIKRHEAFQKAVSTWDERFVLLEKLTTLEEIEMRRKREE
EERKKRPPTPPLPVEEPREEVVKTQVSQTIEGQTDPANILQERINGMQNSFQEQVSVNGL
CTESDSPQPSSDTQRLEDSISENQGPEQSDVTNGARTEVITKDGSPTPSPQLVARPTFSP
INLQYSTLPSSPTEPLASEQMEGMLHRKQEMDSHNKKAANRSWQNVYCALKRGSLGFYKD
AKSAASGVSYHSEPSVQLNGAQCSVAHDYKKRKNVFKLSLLDGKEYLFQAKDEAEMSSWM
RVINASLTSSPGDPSDHSPGIMKGMTRAMTMPPVSPNSGTEGSVTLRNKDGKEKDREKRF
SFFKKK
NT seq 7221 nt   +upstreamnt  +downstreamnt
atgtttcagttcgactcccctgcatacgaggatgtgccccggcctgcctcccccggtccc
cggcttgcctcccctgtcccccgatctggctcccctctcctatcccctgcggcttttgta
aatgcagtgcaatacgctaacgtgctggaaggaaggttcaagcagctgcaagatgaaaga
gaagctgtgcagaagaagacatttactaaatgggtcaactctcacttggcgagggtcacc
tgtagaatttctgatctctacaatgatttacgagatggacggatgttaattcgactgtta
gaagtgctatctggagagcagctgccaaaacccacaaaaggtcgaatgcgaatccactgt
ttggaaaatgtagacaaagcccttcaatttttaaaagagcagaaggtacatttggagaac
atgggatcacatgacattgtggatggaaaccatcgattaaccctagggttaatctggact
attattttaaggtttcagatccaagatatcagtgtagagacagaagataataaagaaaag
aagtctgctaaagatgccttactgctttggtgccagatgaagactgctgggtatccaaat
gtcaatgttcacaactttaccaccagctggcgagatggacttgcgtttaatgccattgta
cacaagcacagaccagatataattgactttgacacactgaagaagtctaatgcacaccac
aacctccagaatgccttcaatgtagctgaaagagagttaggtcttactaaacttctggat
cctgaagatgttaatgtggatcagcctgatgagaaatccatcataacctatgtggccaca
ttttatcactatttttccaaaatgaaagccctagctgtggaaggaaagcgtattggaaag
gtacttgaccaagctattgaagctgatcagttaattgagaactatgaaggactggcatca
gaactcctgcaatggattgaacagatgatcattactctcaatgaccgaaaactggcaaac
tctctaagtggtgttcagaaccagctgcaggccttcaacacctacaggactgtagaaaag
ccgcccaagttcacagaaaagggcaatttggaagttcttctctttaccatacagagtaaa
atgagagctaataatcaaaaagtgtatacgcccagagaaggaaagcttatatctgatata
aacaaggcatgggagcgactagaaaaggcagagcatgaacgtgagcttgcccttcgcaat
gaacttatacgccaggaaaaattagagcagttggctgcacgatttgaccgtaaagcagcc
atgagggaaacctggctaagtgaaaatcagagacttgtagctcaggataacttcggtgtg
gacttaactgcggtggaggcagcgctacggaaacatgaagctattgaaactgatatattg
gcttacagtgagcgcgtgcaagcagtgaatgcagtggctgatgagctggaagcagagaat
taccatgatgtccggaggattttggctcggaagtgcaatgtgattcgtctctctgattat
ttaagagagcttgtcactgccaggaggcaaaggcttcatatgaacctagaattgcagagg
atgttccaggatttacattatctcatggactggactgaagatatgaagggccgtctgcag
tcagaagattatggcaagcatcttcatggcgtggaagaccttctccagactcacactctt
gtggaggcagacattgcagttcaggcagaacgtgtgaaatcagttacagctgtagctcag
aaatttatgacagaagatgaaggctacaagccttgcgacccagagctagtgcgcaaccgg
gtgcatctcttggaacagcgctatgcagagctgtgtaatctttctgcggctcggagatca
aagctggaagaatcccgccgtctctggaaatttttctgggacatgggagaggaggaagcc
tggatccgtgagcagagtagattactactttctgatgactatgggaaagaccttaccagc
tcacttaggttgatcagcaagcataatgccttcagaggtgagatgagtggacaccgtggg
ccgttgcagcagactgtggctgagggtgaggaactaatatccaaaggtcactttggtgca
ggagagattgaggaaaggataaaagaagtgaaaggccagtggacagagatggaggcctta
gctgaagacagggaaaggaggctaagagaggcctacagctattatcagtttcaagctgat
gccaatgatgctgaggcttggatcctggacactttacgccttgtttctaccagtgaagta
ggacatgatgagtattccacacagacactggtgaaaaagcacaaagaaatagaagaggag
atccttagccaccgaccagctattgatgcgctgcatgaacaggcccgtggccttccacct
gcttactctcattcacctgaagttgatggaaggttaccagccctggagcagcgctatgag
gaattggtggctcttgctgctcaccgcaagcaggctctgcaagattctctggctcttcat
aaaatgtttagtgaagctgatgcttgccttttgtggattgatgagaaagaacagtggctt
aatgtcacagagattccagaaaaacttgaggacctagaagtagttcaacaaaggtttgaa
actctagaggcagagatgaataatttggcatcccggattgcatctgtaaatgaagttgct
ggacagttgctgactacagaccagagaaatgaaaacagcatccgagacatgcaagatcaa
cttaattctcggtggaatgaattccgcaagcttgttgaccaaaagaagggtgctttggat
tctgctctggatatacagaattatcatttggagtgcaatgagactgtgtgctggatgagg
gagaagacaaaggttattgaatccacacagagcctagggaatgatcttgcaggagtaaca
gccctccagagaaaacttactggaatggagcgtgatctgaaagccattcagggaaaagtg
ggtgacctgcgttcagaggcagaaaagcttgcagatgggcacccacagaaagcaccggcc
ataattggccgcttatcagatattgatgagacctggggagaactaaaggacactatgaaa
agaagagaagaaactttaggtgaagcaagcaagctgcagggatttttgagagaccttgat
gatttccagagctggttgtcccgggcccagacagcagtggcatctgaggatgttccagct
gacctagcagaagcagagcgccttcttgcacaacatgaaggcataaaaaatgagattgat
cattatggagctgactaccacagagtgagagatgttggtgaagaagtcactcgtgggcaa
acagatgcccaatatatgttcttgcaacagagactgaaggcgctagacactggctggaat
gagcttggacagatgtgggaaaacaggcaccagttgttgtcccagggtcacagcttccag
cagtttttgaaagatacaaaacaagtggaggggttccttaataaccaggagtatgtcctt
tcccataccgaaatgccaagtacgctacaggcagctgaagctgccatcaaacgccatgaa
gatttcctcacaaccatggatgccaatgaagagaagatacagggtcttgtagaatctggg
aggaagctaattgaggaacagaatgtcaattctgagaagattcaagaaaaagtcacttct
attgatgagagacacaaaaagaaccaaaaaactgctagcgaagtattaactcgtttgaag
gacaaccgtgatcttcaacatttccttcaagactgtcaagagctcaccctctggatcaat
gaaaaaatgcttactgctcaagatgtttcttatgatgaagctcgaaacctgcatagcaag
tggcaaaagcatcaggcattcatggcagaactggcctcaaataaagactggcttgacaaa
atagacaaggaagggcagcagctcatgtcagaaaaaccggagcttgaaccagtagtgaga
gaaaaactagacactctgcataagctgtggaatgacttggaatctaccacacaaagtaaa
gctcagtgtctgtttgatgccaacagggcagagttattcacacaaagctgttctgctctg
gagagttggcttcaaaacctcgagtcacaactacagtcagatcattatggcaaagatctg
accagtgtcaacatcctattaaataaacagcagatgctggagaaccaaatggaagtgagg
gagaaggagctagaagctatacagtcccaggcacaggcccttggacaggaggatgccaac
atagtggaggttgactcaaagcataaggatgtagcagataaattttccaagctgcgtgct
cctctaaacaagagaagaaaattacttctagcctccaaggaaggacatcagtttaacagg
gacctggaagatgaaatactttgggtaaaggagaagatgccaatggcaatctccactgat
catggaaaagatctcccgacagtccagcttcttatcaaaaagaatcagacactccaaaag
gaaattttgggacatcaaccacggattgatgacatcctggagagaggcaaatctatgatc
caagacagctctctggaccctcaagagatagaagaaaggcttgggctactgaaaagcaca
tgggaagagctggcagcagaaggaggaaagcgccatgcccgtttagaggaatctcttgct
gctcagcagttttatgctgatgcggcagaagctgaggcctggatgggagagcaagagtta
catatgatgtctgaagaaaaagccaaggatgagattggtgcccaggcaatgctgaagaaa
cacttagtaatggaacaggctcttgatgactatgcagacaacatccatcagcttgccaat
tcaagccgcgacatggtctccagaggtcatccagaaagtgatcgtattacccttcgtcaa
gggcaagtggacaagctatatgccagtcttaaagacctggcagaggagagacaaggaaag
ctacaagagcaccacagactttgccaactcaagagagatgtcgaagaccttgagcactgg
atctctgaacgtgaggtggttgcagcttctcatgaacttgggcaagattatgagcatgta
acgatgctgagagacaaattccgtgagttctcccgtgacaccagtaacattggtcaagag
cgggtggatgctgtcaatctgatggcagatgatttaatttcatctggacattcggaaaat
gctactgtagcagattggaaagaccagctaaatgaggcatgggctgatcttcttgagatg
attgacactcgaagtcagatgctggcagcctcatatgaacttcaccgtttctaccaggat
gcaaaagaaaccctaggtcagatccaagacaagcagaaacaaataccagaggagacaggc
agagatctgaatacagcagaagccatgcagcgcatgcacaccgcttttgaacatgatatc
caagccctgagtgcacaggtgaagcaagtccaggaagatgcttctcgcctccaaaaagct
tatgctggtgaaaaggcagcagacattcatcgccatgagcaggcagtatcggaagcttgg
ggagagttgcagaatgctagtggtgccaggcggcagcttcttcttgacactgtggagaaa
ttccgtttcttcagaatggtgcgagatctcatgttatggatggatgatataaacctgcta
attgatgcacaggagaagccaagagatgtatcctcagctgatttagtcatccaaaaccac
ctaggcatcaaggcagaagtggatgcgcgagctgacagctttactacatgcatagatctt
ggcaactctctcctagagaagaatcattatgcctctgacaagatttcagagaaactggag
caattgcaggaaagaaggcaggagactgaaaacaaatggaaagataaaatggcatggctg
agagttgtccacgaagtgctgatgtttggaagagatgcaagtgtagctgaggcttggctg
gccagccaggagcccattgtccggtcgtcagaacttggtggcaatgtcgatgaagtagaa
tccctgataaaaagacacgaagcctttcagaaagcagtttctacatgggatgagagattt
gttcttcttgaaaaactaaccacgttagaagaaattgaaatgcgtcggaagcgggaagag
gaagaaagaaagaaaagaccaccaacaccacctctaccagtagaagagcctcgagaggaa
gttgtaaaaacccaagtttcccagactattgaagggcagactgatccagccaatatactt
caagaaaggataaatggcatgcagaattcattccaggagcaagtatctgttaatggactg
tgcacagagtctgattctccacagccatcgtccgatacacagaggttagaagacagcatc
tctgaaaatcagggtccggaacagtcagatgtaaccaatggagccaggactgaggttatt
accaaagatggaagtccaacaccttctccacaacttgtggctaggccaaccttctccccg
ataaacctccagtattctactttgccatctagccccactgaaccattggcatctgagcaa
atggaaggaatgctgcaccgcaagcaggaaatggattctcacaacaagaaggctgcgaac
aggtcctggcagaatgtttactgtgcactgaaaaggggcagtctgggtttctacaaggat
gctaaaagtgcagccagtggcgtttcttatcattcggagccctccgtccaacttaatgga
gcccagtgcagtgttgctcatgactacaagaaacgcaagaatgtcttcaagctaagcctt
cttgatggcaaagaatatctgttccaagctaaggatgaggctgaaatgagtagttggatg
cgagttataaacgcctccctaacttcctccccgggagacccctcagaccattcaccgggc
atcatgaagggtatgacccgggccatgacaatgccaccagtatcacccaacagtggtaca
gagggatcagtcacattgcgcaacaaggacgggaaagaaaaagaccgggaaaagagattc
agtttctttaagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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