KEGG   Xenopus tropicalis (tropical clawed frog): 100490337
Entry
100490337         CDS       T01011                                 
Symbol
gcnt1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
  KO
K00727  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:2.4.1.102]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00512  Mucin type O-glycan biosynthesis
xtr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    100490337 (gcnt1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:xtr01003]
    100490337 (gcnt1)
Enzymes [BR:xtr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.102  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
     100490337 (gcnt1)
Glycosyltransferases [BR:xtr01003]
 Glycan extension
  O-Glycan
   100490337 (gcnt1)
SSDB
Motif
Pfam: Branch Exop_C
Other DBs
NCBI-GeneID: 100490337
NCBI-ProteinID: XP_002942654
Xenbase: XB-GENE-996858
UniProt: A0A7D9N0A4
Position
1:131972645..131980713
AA seq 426 aa
MLTRKLRHCKVKRVNFLFLVALAVATFTFITSRSKYAFFTNLELTEDNPIISANCTKIIK
GDVEEIQNAKLELLTVKYKSQQHQLTDEDYINMTNDCEAFTRDRKYLLYPLSKEEREFPI
AYSIVVYHRIDMLERLLRSIYTPQNYYCIHVDKKSSTSFLNAVKAITSCFENVFIASQLE
NVVYASWARVQADLNCMTDLHNKNAKWKYLINLCGMDFPIKTNREMVEMLKGLKSQNSLE
TEKMPPHKEVRWRKHYEIVDNAIRKTEEDKTPPPLETPVFSGSAYFVVTRAFVSYILENE
KIQRFLEWSKDTYSPDEFIWATLQRIPGVPGSVPANSKYDVSDMNAYARFVKWAYLEGDV
AKGAPYPPCAGNHVRSVCVFGAGDLEFMLQKHHLFGNKFDIDVDPTAIKCLEEHLRHKAL
NPELQI
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgctgacacgcaaactacgacattgtaaagtaaaacgagtgaactttttgttccttgtg
gcacttgctgtagcaacctttacatttataacaagccgcagcaaatatgctttttttacc
aacctggaacttacagaagataatccaattatttctgctaactgcaccaagattataaaa
ggagatgttgaggaaatccagaatgccaaattggagttgttaacagtcaagtacaaaagc
cagcagcatcagctcacagatgaagactatatcaatatgacaaatgactgtgaagccttt
accagagaccgaaaatatttattgtacccactaagcaaagaagaaagggagttccccatt
gcatattcaatagtggtctatcataggattgacatgctagagaggcttctgcgctccata
tacactcctcagaattactactgcattcatgtggacaagaaatcttctacatcttttcta
aatgcagtgaaggccattacttcttgttttgaaaatgtgttcattgctagccagttagaa
aatgtggtgtatgcatcatgggctagggtgcaggccgatctaaattgtatgactgatctt
cacaataaaaatgcaaaatggaaatacttaataaacctctgtggtatggatttcccaata
aaaactaaccgagagatggtagaaatgttaaagggattaaagagtcaaaacagcctggaa
actgaaaagatgcctccccataaagaggttcggtggcgaaaacattatgagattgttgac
aatgccattaggaaaactgaagaagacaaaacacctcctccactcgagacaccagtgttt
tctggtagtgcctacttcgttgtaacacgagcatttgttagttacattttggaaaatgaa
aaaatccaacgttttttagaatggtctaaggacacatacagtcctgatgaatttatatgg
gccactcttcaacgaattcctggagtaccaggttctgtaccagctaatagcaaatatgat
gtttctgatatgaacgcttatgccagatttgtaaaatgggcatacttagaaggagatgtg
gccaaaggagcaccatatcccccttgtgctgggaatcatgttcgttccgtttgtgtattt
ggggctggggacctggaatttatgctgcagaagcaccacttgtttggtaacaagtttgat
atcgatgtggaccctactgccattaagtgcctagaggaacatttaagacacaaagcactc
aatccagaactacaaatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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