KEGG   Xenopus tropicalis (tropical clawed frog): 100490820
Entry
100490820         CDS       T01011                                 
Symbol
krt78.4
Name
(RefSeq) keratin, type II cytoskeletal cochleal
  KO
K07605  type II keratin, basic
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    100490820 (krt78.4)
   04147 Exosome [BR:xtr04147]
    100490820 (krt78.4)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     100490820 (krt78.4)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   100490820 (krt78.4)
  Exosomal proteins of other body fluids (saliva and urine)
   100490820 (krt78.4)
  Exosomal proteins of colorectal cancer cells
   100490820 (krt78.4)
  Exosomal proteins of bladder cancer cells
   100490820 (krt78.4)
SSDB
Motif
Pfam: Filament Keratin_2_head AAA_13 TPR_MLP1_2 CENP-F_leu_zip Muted DUF1192 Phosphoprotein Apolipoprotein COG5_N Baculo_PEP_C Bap31_Bap29_C Laminin_II
Other DBs
NCBI-GeneID: 100490820
NCBI-ProteinID: XP_002935784
UniProt: A0A6I8S576
Position
2:147984874..147991518
AA seq 522 aa
MSQVRKSLSSKPGSCNVRGYTACSIGGGFVGPKYNFSSLSSAGGNPIHHNSGKLKSTGSL
YCLGGHKRTSISSGRVLGSTLGTSKGFGTDSFPVCPPGGIQKVTVNQILLQPLNVDIDPN
IQKVRSAERDQIKCLNNKFASFIDKVRFLEQQNQILGTKWNFLQDKSQKLCSRRDTIKPL
FDAYITNLQRQLEGLRSEKCRLDGELKNMQDVVEEFKCKYEEEINKRTCAENQFVGLKKD
VDVLYMKKAELEAKEETLANEISFLRSLFDAELAELQDCLSDINVVLCMDNNRELDLNGL
IAECKAQYEEIAARSKTEAEAAYARKFQQLKETAGLHGDNLKSSKTEIQDLNTMIKRLQS
EIECVRKQIAGLQAAICDAESRGEATLKDARCKMSELEAVLQKAKEDLAIQLKEYQELLR
VKLALDVEIATYRTLLEGEESRMHGEITNDVKISVYTTGKLGSSNAECISTCNLKSSGSI
LAGVDGPKCATKCISKCVPKCAPKCAQSPKPCGTTCTKPSYM
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagccaagtccgaaagtccttgagcagcaaacctggatcatgcaatgttcgaggctac
acagcttgttccattggtgggggatttgtagggccaaaatataattttagctctttatct
tctgctggaggtaaccccatccaccacaacagtggaaagctaaaatccactggaagccta
tattgtttagggggtcacaaaagaacctctatcagcagcgggagagtccttggttccacg
ttgggtaccagcaagggatttggaactgacagctttcctgtatgtccaccaggaggtatc
caaaaggttacagtcaaccaaattcttctccagccattaaatgtagatattgacccaaac
atccaaaaggtgcgctctgcagaaagggatcagatcaagtgcctcaacaacaaatttgcc
agttttattgacaaggttcgatttctggaacaacaaaatcaaattctgggaacaaaatgg
aactttttgcaagacaaaagtcagaaactttgctctaggagagatactattaaaccattg
ttcgatgcttacattaccaaccttcagcgccaactggaaggattaaggagtgaaaaatgt
cgcctagatggggaactgaagaacatgcaggatgtggtggaagagttcaagtgcaaatat
gaagaagagattaataagagaacatgtgctgaaaatcagtttgtaggcctcaaaaaggat
gtggatgtcttatacatgaaaaaagcagagttggaggccaaagaggaaactttggcaaat
gagatcagcttcttgaggagcctctttgatgcggaactggctgaactacaagattgtctg
tctgatattaatgttgttctgtgcatggacaacaaccgggaattggacctgaatggcctc
attgcagaatgtaaagcacagtatgaagaaattgcagccagaagcaaaacggaagctgaa
gctgcatatgccagaaagttccaacagctgaaggaaacagcaggactacatggagacaat
ctaaaaagctctaagactgaaattcaagacctgaataccatgataaagagacttcagtca
gagattgagtgtgtgaggaaacagattgctggtctgcaagctgctatttgtgatgctgaa
tccagaggagaggctactttgaaagatgccagatgtaagatgtcagagttggaggccgta
ttacagaaagccaaggaggacttggccattcaactgaaggaatatcaggagctcctcagg
gtcaaattggcactggatgttgagattgctacctacagaactcttctggagggagaggag
agcagaatgcatggagagattactaatgatgtcaaaatatctgtgtacactactggaaag
cttggaagctcaaacgctgaatgtatatctacatgcaacttgaaaagcagtggaagtatc
cttgcaggagtagacggtcccaagtgtgccaccaagtgcatctccaagtgtgtccctaag
tgtgcccccaagtgtgcacagtcaccaaaaccctgtgggaccacctgtactaaaccaagc
tatatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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