KEGG   Xenopus tropicalis (tropical clawed frog): 100492997
Entry
100492997         CDS       T01011                                 
Symbol
trim13
Name
(RefSeq) tripartite motif containing 13
  KO
K12003  tripartite motif-containing protein 13 [EC:2.3.2.27]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100492997 (trim13)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100492997 (trim13)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100492997 (trim13)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 ATP-synt_E_2 zf-Nse zf-RING_4
Other DBs
NCBI-GeneID: 100492997
NCBI-ProteinID: XP_004912024
Xenbase: XB-GENE-961103
UniProt: A0A8J0R0X9
Position
2:149422192..149427488
AA seq 411 aa
MDVMEVLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLDGVLEENSRTMQWRPSSFKCPTC
RKETPTMGVNGLQVNYLLKGIVEKYNKIKVSPKMPVCKEHSDQPLNIFCSTDLKLICGSC
ATTGEHKKHVFSSIGDAYIQEKSSLETLFQGVEEWNSKEVHSHLDTLESNKRKALHSLAK
ESDKVKAYFEKLQYLLEQKKNEILSDFETLKLAVMQAYDTEINKLHTVLSEQRKACNIVE
DLKNISDPFMFLQQMQEFRDKMSFIKEAPLTTGQDVNVNPAMKEFDTSMWDSIKLGEVDK
LSLPQDITSKKEPGDAKTLHSLKPILVVACLILLLVTFLCAYPFIDSLPTFTIDLQVISS
YFFTTTAKAANLTILFWEQLSEELLILKQRCQTYVSVFLENVAEFVCKYKL
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggatgtgatggaggtgctggaggaagatctaacgtgcccaatctgctgtagccttttt
gatgacccaagagtcttaccttgttcacacaacttctgcaagaaatgtttggatggtgtt
ctggaagagaactctcggactatgcagtggaggccttcctctttcaaatgccccacatgc
cgtaaagagaccccaacaatgggcgttaatggccttcaggtaaactatttgcttaaaggc
attgtagaaaaatacaacaaaattaaggtttcaccaaagatgcctgtctgtaaggagcac
agtgatcagcctctcaatattttttgctctactgacttaaagctgatttgtgggagctgt
gccaccactggagaacacaagaagcatgtattttcctccattggggatgcttacattcaa
gagaaaagctctttggagaccttatttcagggtgttgaagagtggaatagcaaagaggtt
cactcccacctggacaccttagaatctaacaaaagaaaggctcttcattcacttgccaag
gagtcggacaaagtcaaggcctattttgaaaaactccagtatctgctggaacagaagaaa
aatgaaatcctctccgatttcgagaccttgaagcttgctgtgatgcaggcctacgacact
gagataaacaagctccatacagttctcagtgaacagcgaaaggcttgtaatattgttgaa
gaccttaagaatatatctgatccttttatgttcctacagcagatgcaggaatttagggat
aagatgtcatttatcaaggaagcccctttgactactgggcaagatgtcaatgtcaatcca
gccatgaaggagtttgatacaagcatgtgggacagcattaaactgggggaagtggataaa
ctatccctaccacaagacataaccagcaaaaaagagcctggagatgccaagaccttgcat
agtttgaagccaattttggtggttgcctgtctaattcttttgctagtgacattcctttgt
gcatatccttttattgacagccttccaaccttcactattgacctgcaggtgatatcttca
tacttctttaccacaacagcaaaagcagccaacctaaccatcctgttctgggagcagctt
tctgaagaattacttatcttaaaacaaaggtgccagacatatgtctctgtgtttctggag
aacgtagcggaatttgtttgtaaatataagttataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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