KEGG   Xenopus tropicalis (western clawed frog): 100493499
Entry
100493499         CDS       T01011                                 

Gene name
aff3
Definition
(RefSeq) AF4/FMR2 family member 3 isoform X1
  KO
K15195  AF4/FMR2 family member 3
Organism
xtr  Xenopus tropicalis (western clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100493499 (aff3)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     100493499 (aff3)
SSDB
Motif
Pfam: AF-4_C AF-4 AF4_int
Other DBs
NCBI-GeneID: 100493499
NCBI-ProteinID: XP_031752871
Xenbase: XB-GENE-1005828
Position
2
AA seq 963 aa
MTWQDPGHSFAHQQQLKTSDRKMVGSATKDCIGGHQKCVMEKNKNCLLQPVLSPSSSDNP
PQNILVSNKNSSHRRQHPQLNCSLEISSSAPCMQNFSATKLNAVQQKPTAYVRPMDGQEQ
AVDESPKLKSSTEVNILLPLYRELCHKRVSDKIKSDEIDTCSNLNQEEENHLSNIGLSSK
KNADFKDRSPTKCAPQISMLEDDLKLSSDEEDIDQQAVQEESLGVQSDSGEVQDLSKRTS
GVSTLTSSSSSESDTSSESDSESESSSSEAECTKASGYISPEPEQPTSNKWQLDKWLNKV
HPNKTVILSNTHCPSYGSLKEDAGNSENLSQICQSNHNCNKDTREDKRPWNICTDLGNNK
DTGLKSSASIEIAASIAVAVPTTESTFQRQPACRKLTRRTEQTSTGDKQNCYSPDEPSLN
QATVGDNITEQPKSRLLGTGRGLYKRDPRTSKLGAEIRRTRGLNRSASKSKEFIQFSSQS
SDLGIETELEISALSTNTSATPATENNHRLKEWGGNNINRASPCVANTTTTTDLAKELDE
QYYTLVPFGRNENVFSIKGNDEVKSLWVRIDLTLLSRIPVELAQETLIMNTSMKEAHRSS
THKSFTSVAEKALEKTRKKRKSENEASREVKKNHVEKDNCLQETVLSDTFDMANLHSTNP
IRTSMSESKSHVYQRSLHVPSETSTLLHTEDVHLNLWSSLPHGHKDLRSQMLFDNRPRSA
DYFMQEAKQMKHKADAMMDKFDKVLNYTEAALSFIECGNAMEHGPIESKSPYTMYAETVE
LIRYALRLKSHSGPNATSQDKKITALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKSS
SKASQASSSQGSNGKTTGTPSPTSPSPSSVSSVGSQGSTSNSSIISIPQRIHQMAANHVS
ITNSILHSYDYWEIADNLTKDNQEFFNELDVLMGPITLHSSMEHLVQYTRQGLHWVRHSA
HML
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgacctggcaggatcctggccattcatttgcgcatcagcaacagttaaaaacatctgat
cggaaaatggttggttctgctacaaaagactgtataggtgggcaccagaaatgtgttatg
gaaaaaaataaaaactgcttgttacaacctgtattatcaccatcctcatctgataaccct
ccacaaaatattttagtgagtaataagaacagttcccacaggagacaacatccacagcta
aattgcagcctagaaatcagcagcagtgcaccctgtatgcagaacttttctgccacaaag
ctgaatgcagttcagcaaaagcctactgcatatgtgcgtccaatggatggtcaagaacag
gcagtagatgagtcgccgaagctaaaatcttccaccgaagtgaatattctcctccctttg
tatagagaactttgccataaacgtgtctctgacaagataaagtctgatgaaatagataca
tgctccaatctcaaccaagaagaggagaatcatctgagcaacataggactatccagtaaa
aagaatgctgatttcaaggacaggagcccgacaaagtgtgcacctcagatatcgatgttg
gaagatgacttgaagctaagcagcgatgaggaggatattgatcagcaggcagttcaggaa
gaatccttaggagtccaaagtgacagtggggaagttcaggatctcagtaaaagaacttca
ggagtttccacactgacaagcagcagctccagtgaatctgacactagttcagagtcggac
tctgaaagcgaaagcagttccagcgaggcagagtgcactaaggcttcaggctacataagc
cctgagcctgagcaaccaacatcaaacaaatggcaattggataagtggctcaacaaagtt
catcctaacaaaaccgtgattctcagcaatacacattgcccttcttatggtagtttaaag
gaggatgctggcaacagtgaaaatttgtcacaaatatgccagtctaaccataactgtaat
aaagatacaagggaggacaaaagaccatggaacatatgcacagacctagggaataataaa
gacacaggattaaaatcttcagcttccattgaaattgctgcttcgatagctgttgcagtt
cctacaacagaaagcacttttcagagacaacctgcttgcagaaaactcacaaggaggaca
gaacagacatctactggagataaacagaactgctatagtccagatgagccttccttaaac
caagcaactgttggtgataatataacagaacagcctaaaagcagattgttgggaacaggt
agaggtttgtacaaaagagatcccaggacatctaaactaggggctgaaattaggaggact
cgaggtttaaacagatcagcttccaaatccaaggaatttattcagttttcatctcagtct
tcagatcttggaatcgaaacagaactggaaatctcagctctttccacaaatacatcagcc
actccagcaactgaaaataaccacagacttaaggagtgggggggcaataatattaatagg
gccagtccatgcgttgccaataccactaccacaactgacttagctaaggagctggatgaa
cagtattacacactggttccatttggtaggaatgagaatgtcttttcaataaagggcaat
gatgaggtcaagtcactttgggtcaggattgatttaactcttttatcaagaataccagtg
gaactggcccaggagactcttatcatgaataccagtatgaaagaagcacacaggtcctca
actcataaaagttttacttcagtagcagagaaggctttggagaaaaccaggaagaaacgt
aagtctgaaaatgaagcgtctcgggaagtgaaaaaaaatcatgtagaaaaggacaactgt
ttgcaagaaactgttttatctgacacctttgatatggccaatttacacagcaccaacccc
atcaggaccagcatgagtgaaagcaaatctcatgtttatcagagatccctccatgttcct
tcagaaaccagcactttgcttcatacagaagatgtgcacttaaacctttggtcatctttg
ccacatgggcacaaagatttaagaagtcagatgttgtttgacaataggccgcgcagtgca
gactattttatgcaagaagctaaacagatgaagcataaagcagatgcaatgatggacaaa
tttgacaaagttctgaattacactgaagcagccttatcgttcattgagtgtgggaatgca
atggaacatggccccattgagtcaaagtctccatatacaatgtatgctgaaacagtagaa
ctaataaggtatgccttgaggttaaaatcacactcgggtcctaatgcaacttcccaggac
aagaaaatcacagcattatgctatcgctgtttggctcttctgtactggagaatgtttagg
ctcaaaagggatcatgctgtaaagtactcaaaagctcttattgactatttcaagagctca
tctaaagcatcccaagcttcatcctcacagggttccaatggaaaaaccactggtactcca
tcccccacatcacctagtccttcttcggtgagttctgttggttctcaaggaagtacctcc
aacagctctattattagcatcccacagcgaattcaccagatggcagcaaaccatgtcagt
attaccaacagcattctgcacagctatgactactgggagattgctgataatctcaccaaa
gacaaccaagagttctttaatgagcttgatgtgttaatgggaccgatcacgctgcacagt
tcaatggagcacttagtacagtacacacgtcaaggacttcattgggtacggcacagtgca
cacatgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system