KEGG   Xenopus tropicalis (tropical clawed frog): 394544
Entry
394544            CDS       T01011                                 
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    394544 (dbr1)
   03009 Ribosome biogenesis [BR:xtr03009]
    394544 (dbr1)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    394544 (dbr1)
Ribosome biogenesis [BR:xtr03009]
 Eukaryotic type
  90S particles
   RNase
    394544 (dbr1)
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 394544
NCBI-ProteinID: NP_988947
Xenbase: XB-GENE-5851881
UniProt: Q6P886
Position
9:54906237..54918548
AA seq 534 aa
MKIAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQ
MQTFYKYYSGEKLAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYVGYAGVVKYRGVRI
GGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRNIEVFRLKQLKEPMDIFMSHDWPRSI
YHYGNKKQLLKKKDFFRQEVENNTLGSPAASELLLHIQPSYWFSAHLHVKFAAFMQHQTN
VEGEIPKATKFLALDKCLPHREFLQIVDVEHDPGKPDCLEYDLEWLAVLKATKDLLNITS
KTWNMPENNGLHSRWDFSASEKTKREILDDLGHDIKIPCNFCMTTACYDPNNPQYKRVAT
HIVNPQTTEFCARLGLVDLNAKIRQHEEEGDIDITEDNEADSIGSAEDPGEYSTDTSLLS
TSINPDEIALEDDDDQEDEGMAEKLGEPSPDYTPDLSINFSNIRVLPDSMAVSSDDATDS
TNDELDRSESSQTEGEGKQSNRPLKRMSNENGSGGVKIKRRNQAIYQAKDDEDE
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgaagattgcagtggaagggtgctgtcatggtgagctggataaaatctatgaaactatc
cagtttcttgagaagaaagagaacacaaaagtagatctgctgctgtgctgtggagatttc
caagctgtgagaaatgagggggacatgaaatgtatggctgtaccacagaagtatcgccaa
atgcagactttctacaaatattactctggtgagaaactggcccctattctaacaatcttt
attggaggaaaccatgaggcatcaaactacctccaagaactaccttatggaggctgggtt
gcaccaaatatttactacgtgggctatgcaggggtggtaaaatatcgtggagtgagaata
ggtggaatatctggaatatttaagtcacatgactatcgaaaaggtcattttgaacgacca
ccttacagtaaggacactgtaagaagtgcctaccatgtgaggaacatagaggtctttagg
ctaaagcagttaaaagaacccatggacatttttatgtcacacgactggcctagaagcatc
tatcactatggaaacaaaaaacagcttctaaaaaagaaggatttcttcaggcaggaggta
gagaacaacactctggggagtccagcagcttcggaacttctactccacatccagccatcg
tactggttttctgcccatttgcatgtgaagtttgctgcttttatgcagcatcagactaat
gtagaaggagaaatacccaaagccacaaagttcttagcattggataaatgtctgccacac
agagaattcttgcaaattgtggatgtggaacatgatcctggtaagcctgactgccttgag
tatgatttggaatggttggctgttcttaaagccaccaaggatcttctaaacataacttca
aagacttggaacatgccagagaataatggtctccattccaggtgggattttagtgcctct
gagaaaactaagagagaaattttggatgatctgggacatgacatcaagatcccttgcaac
ttctgtatgacaacagcttgctatgaccccaacaacccacaatacaagagggtggctact
cacattgtaaacccacaaacaacagaattctgtgccagactgggacttgtagacctaaat
gccaaaatccgccagcatgaggaagagggagacattgatatcacagaggataatgaagca
gacagtattgggtctgcagaagaccctggtgaatacagcacagacacttcacttctctca
acttctatcaatcctgatgaaattgctttagaagatgatgacgatcaagaagatgaaggt
atggcagaaaagttaggcgaaccttctcccgattatacacctgatctctccataaacttt
tccaacattcgggtgctgcctgattctatggctgtatcttcagatgatgctacagattct
acaaacgatgagcttgatcgttctgagagcagccagactgaaggagaggggaaacagtcc
aacagaccattgaagaggatgagcaatgagaatgggagtggtggggtaaagattaaaagg
cgaaatcaagctatataccaagctaaagatgatgaagatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system