KEGG   Xenopus tropicalis (tropical clawed frog): 394590
Entry
394590            CDS       T01011                                 
Symbol
snu13
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008  Ribosome biogenesis in eukaryotes
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    394590 (snu13)
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    394590 (snu13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    394590 (snu13)
   03009 Ribosome biogenesis [BR:xtr03009]
    394590 (snu13)
Spliceosome [BR:xtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    394590 (snu13)
Ribosome biogenesis [BR:xtr03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    394590 (snu13)
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1 UPF0147
Other DBs
NCBI-GeneID: 394590
NCBI-ProteinID: NP_988994
Xenbase: XB-GENE-963821
UniProt: Q6P8E9
Position
4:113915507..113917652
AA seq 128 aa
MTEPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQIQSLQ
QSIERLLV
NT seq 387 nt   +upstreamnt  +downstreamnt
atgactgaaccagaagtgaaccctaaagcctacccacttgcagatgcccagctcacaaaa
acccttttggatcttgttcagcaagccgctaattacaagcagcttcgcaagggtgctaat
gaagctacaaaaaccctaaacagaggcatagctgagtttatagtcatggcggctgatgca
gaacccttggaaattattctacacctcccactcctgtgtgaagacaagaatgtcccctat
gtgtttgtgcgctccaagcaagcacttggaagagcttgtggagtctctaggccagtgatt
gcttgtgcagtcaccataaaggaaggttcccagctgaagcctcaaatccagtctcttcag
cagtctattgagaggctgctggtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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