KEGG   Xenopus tropicalis (tropical clawed frog): 394632
Entry
394632            CDS       T01011                                 
Symbol
etf1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
  KO
K03265  peptide chain release factor subunit 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    394632 (etf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    394632 (etf1)
   03012 Translation factors [BR:xtr03012]
    394632 (etf1)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     394632 (etf1)
Translation factors [BR:xtr03012]
 Eukaryotic type
  Release factors
   394632 (etf1)
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 acVLRF1 baeRF_family10 Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 394632
NCBI-ProteinID: NP_989035
Xenbase: XB-GENE-5744577
UniProt: P62498
Position
3:20585809..20610253
AA seq 437 aa
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcggatgatccgagtgccgcagataggaacgtggagatatggaagatcaagaaacta
attaaaagcttggaagccgctagaggcaatggtaccagtatgatatctttaatcattcca
cccaaagaccagatttctcgagtggcaaaaatgctggctgatgaatttggtaccgcatct
aacattaaatcacgagtaaacagactttcggtcttgggagcaattacatctgtgcagcag
agacttaaactctataacaaagttccccctaatggtctggttgtttactgtggaacaatt
gtaacagaggaaggaaaggaaaagaaagtcaacattgattttgaacctttcaaaccaatc
aatacctctctctatttatgtgataacaaatttcatacagaggcactcacagctcttctt
tcagatgacagcaagtttggatttattgttattgatgggagtggagcgctttttggcacc
cttcaaggaaacacgcgagaagttttgcacaaattcactgtggatctgccaaagaagcat
ggtagaggaggacaatctgccttgcgttttgcccgactgagaatggaaaaacgacacaac
tatgtccgtaaagttgctgagacagcggtacagctgttcatctccggcgataaagtgaat
gtagcaggtcttgttttggctggatccgcagactttaaaactgagctcagccagtctgat
atgttcgatcagcgattgcagtccaaagtattgaagctcgtagatatatcttatggtgga
gaaaatggttttaatcaagcgattgaattatcgacagaggtcctttcaaatgtgaaattt
atccaggagaagaaattaataggacgatatttcgatgaaatcagccaggatactggaaaa
tactgttttggtgttgaagacacactgaaagctttggaaatgggtgcggtggaaattcta
atagtatacgagaacttggatatcatgagatacgtcttaaggtgcaatgggtcagaagaa
gagaagactctttacctaactcctgagcaagaaaaggacaagtctcacttcattgacaaa
gaaactggacaagagcatgagttaatagagagtatgcctttactagagtggtttgctaat
aactacaagaaatttggagcaacactggagattgttacagataagtcacaagaaggctct
cagtttgtgaaagggtttggtggaattggaggaatcttacgatacagagtagacttccag
ggaatggagtaccaaggaggcgatgatgaatttttcgacctggatgactactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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