KEGG   Xenopus tropicalis (tropical clawed frog): 394699
Entry
394699            CDS       T01011                                 
Symbol
ldb3
Name
(RefSeq) LIM domain-binding protein 3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    394699 (ldb3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    394699 (ldb3)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   394699 (ldb3)
SSDB
Motif
Pfam: DUF4749 PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 394699
NCBI-ProteinID: NP_989095
Xenbase: XB-GENE-922381
UniProt: Q6P644
Position
7:49162135..49270253
AA seq 290 aa
MAYNVSLSGPGPWGFRLQGGKDFNMPLTISRVTPGSKAAQSSVNQGDLVVAIDGVNTDGM
THLEAQNKIKSASYNLGLTLQKSKRPGPVPTATPRMDSPMPVIPHQKVIANTVANSEFVE
RFNPNVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQARGSE
MSSGSESQLVNLPVKDPLVDIASPVYQAVLKNQGKTESEIDDWARRAANLQSKSFRVLAH
ITGTEYMQDPDEDALRRAREKFETERNSPRFAKLRTWHHGLSAKMLNVKS
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcttacaatgtttccctctctggacctggaccgtggggattccgtctgcaaggagga
aaagactttaacatgcccttgaccatctccagagttaccccaggcagtaaagcagcacag
tccagtgtaaaccagggtgacttagtagttgctatcgatggagtcaacacagatggcatg
actcatttagaggctcagaacaagattaaatctgccagctacaacttgggtctcacactt
caaaaatcaaagcgtcctggaccagttcccacagccaccccgcgaatggattccccaatg
ccagtgatccctcatcaaaaggttatagccaacactgttgccaactctgagtttgtggaa
cgcttcaaccccaatgtgctgaaagactctgccctctccacccacaaacctattgaggtg
aagggtccaggagggaaagccactattattcatgcacagtataacaccccaatcagcatg
tattcccaggatgccattatggatgctattgctggccaagcacaggccagaggcagtgag
atgtctagtggctctgaatctcaactggttaacctccctgttaaagatcctctcgtagac
attgcttctccagtgtatcaggctgtgcttaaaaatcagggcaaaactgagagtgaaatt
gatgactgggcacgtcgtgctgccaatctgcagtctaagtccttccgtgtccttgcacat
atcactggaacagaatacatgcaagatcctgatgaagatgcattgagaagagcaagggaa
aagtttgaaacggaacgtaacagcccacgctttgccaaattgcgcacctggcatcacggc
ctttcggcaaaaatgcttaatgtcaaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (23)   
   UniProt (1)   
   RefSeq(pep) (22)   
DNA sequence (24)   
   RefSeq(nuc) (22)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (60)   

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