KEGG   Xenopus tropicalis (tropical clawed frog): 394968
Entry
394968            CDS       T01011                                 
Symbol
psmc6
Name
(RefSeq) 26S protease regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    394968 (psmc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xtr03051]
    394968 (psmc6)
Proteasome [BR:xtr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     394968 (psmc6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_5 AAA_22 PRS7_OB RuvB_N nSTAND3 AAA_14 Prot_ATP_ID_OB_N AAA_18 DUF815 AAA_7 AAA_33 AAA_11 TIP49 RNA_helicase AAA_3 Mg_chelatase bpMoxR TPR_MLP1_2 DUF5906 AAA_24 AAA_28 TsaE NACHT ATPase AAA_25 AAA_17 Occludin_ELL ATPase_2 Parvo_NS1 IstB_IS21 COG4_N AAA_19 DUF4140 Med4
Other DBs
NCBI-GeneID: 394968
NCBI-ProteinID: NP_989342
Xenbase: XB-GENE-978099
UniProt: Q6P307
Position
8:94537331..94549094
AA seq 389 aa
MADPREKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADRD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcggacccacgggagaaggcgctgcaggattacaggaagaaattgctggagcacaag
gagatagatggccggctgaaggaattaagagaacaactgaaagagctcaccaaacagtat
gaaaaatcagagaatgaccttaaagcattgcagagcgttgggcagattgttggggaagtt
ctaaagcagcttactgaagaaaaattcattgttaaagcaacgaatggtccaagatatgtt
gttggttgtcgtcgacagcttgacaaaactaaattgaagcctggaacaagagttgcgcta
gatatgactactctgactataatgcgttatttaccacgagaagtggatccccttgtgtac
aacatgtctcatgaggaccctggaaatgtatcatactctgaaataggtggactttctgaa
cagatccgagaactcagagaggttattgagttgccacttacaaatccagaattgtttcag
cgtgtaggaattataccaccaaagggctgtcttctctatggccccccaggtactggaaaa
actcttcttgcaagagctgttgctagccaactggattgcaatttcctaaaggttgtgtct
agttcaattgtagacaagtacattggggaaagtgcacgactcattcgagaaatgtttaac
tatgccagggatcaccagccgtgtataatttttatggatgaaattgatgccattggtgga
cggcggttttctgaggggacctcagctgacagagagattcagagaactctaatggagttg
ctgaatcagatggatgggtttgatactttgcacagagtaaaaatgataatggctactaac
agacccgacactttggatccagccttgttgcgtcctggaagacttgacagaaaaatacat
attgagttgcccaatgagcaggcaaggttggatattttgaaaatccatgctggtcccata
acaaaacatggtgaaattgattatgaagccatagtaaagctttcagatggatttaatggg
gctgaccttagaaacgtctgcacagaagcagggatgtttgcaatccgagcagaccgtgac
tttgtggtccaggaagactttatgaaagctgttcgaaaagttgcagattctaagaaacta
gagtcgaaactagactacaaacctgtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (39)   
   Pfam (39)   
All databases (55)   

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