KEGG   Xenopus tropicalis (tropical clawed frog): 403092
Entry
403092            CDS       T01011                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    403092 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    403092 (aptx)
Enzymes [BR:xtr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     403092 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     403092 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     403092 (aptx)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     403092 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     403092 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 403092
NCBI-ProteinID: NP_991394
Xenbase: XB-GENE-1015068
UniProt: P61801 A9UL60
Position
1:94454890..94476837
AA seq 347 aa
MIECWLVSKDGKHGRIRLPHAETVVIGRGPETQITDKKCSRHQVQLMADCNKGYVKVKQL
GTNPTSIDGVDIGKEQKVDLKPGHTLHIVNNLYPYVIEFLEGATNPHAKRENENRSSSKR
TQENSLNEGTGTSMKLMKKESNISPSSSSGKNSSCSTEEKYNAQEVKSQGHWSQGLKASM
QDPTMQVFKDDKVVVIKDKYPKARYHWLVLPWQSIANLKVLRAEHLELVQHMHAVGQKIA
KEHSDSKCAPFQLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFLESQAMIE
MIKTHGKVNVKDGVSELLKTPLMCHICRKEQANMPQLKEHLKKHWPT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgattgaatgttggctggtaagtaaggatggaaaacatggtcgaataaggctgcctcat
gcagagactgtggtaattggccgagggcctgagacacagataactgacaagaagtgctct
agacatcaagtgcagctaatggctgattgcaataaaggatatgtgaaggtcaaacagcta
ggaactaacccaacaagtattgatggtgtggacattggaaaagaacagaaagtggacctg
aagcctggtcacactttgcatattgtgaataatctttacccatatgtgatagagtttttg
gaaggagcaacaaatccacatgccaaaagagaaaatgaaaacagaagctcaagcaagagg
acacaggaaaactcattaaatgagggcactggaacatctatgaaattgatgaaaaaagaa
tcaaatatcagcccttccagtagcagtggaaaaaacagcagctgctcaactgaagaaaaa
tataatgcacaggaggttaaaagccaaggccattggagccaaggtttaaaggcttccatg
caggatccaactatgcaggtctttaaggatgacaaagttgtggtgatcaaggacaaatac
cctaaagcacgataccactggttggttttgccatggcaatcaatagcgaaccttaaggtt
ctgagagcagagcatctggagctagtgcagcacatgcatgctgtgggacaaaagatagca
aaggagcactcagattcaaaatgtgcaccatttcagttgggttaccatgcaattccaagc
atgagccatgttcatttgcatgttatcagccaagactttgattccccttgccttaaaaac
aaaaagcactggaactctttcactacggattactttttggaatcccaagctatgattgaa
atgataaaaacacatggcaaagtcaacgtcaaagatggagtgtctgagcttctgaaaact
cctcttatgtgccacatttgcaggaaggagcaagcaaatatgcctcaactgaaggagcac
ttaaagaagcactggccaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (3)   
   KEGG ENZYME (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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