KEGG   Xenopus tropicalis (tropical clawed frog): 448447
Entry
448447            CDS       T01011                                 
Symbol
pax6
Name
(RefSeq) paired box protein Pax-6
  KO
K08031  paired box protein 6
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    448447 (pax6)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    448447 (pax6)
SSDB
Motif
Pfam: PAX Homeodomain HTH_32 HTH_23 HTH_Tnp_IS1 Homeobox_KN DUF6115 HTH_28
Other DBs
NCBI-GeneID: 448447
NCBI-ProteinID: NP_001006763
Xenbase: XB-GENE-484088
UniProt: Q6DII8
Position
4:19055212..19079444
AA seq 424 aa
MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY
YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV
SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCQPQ
EGGGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVF
ARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQP
IPQPTTPVSSFTSGSMLGRTDTALTNSYSALPPMPSFTMGNNLPMQPPVPSQTSSYSCML
PTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTASTGLISPGVSVPVQVPGSEPDMSQYW
PRLQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgcagaacagtcacagcggagtcaatcaactcgggggagtgtttgtgaacggccgaccc
ctgcccgactccaccaggcagaagatcgtggaactggcgcacagcggcgcacgtccctgc
gacatttctcggattctgcaggtgtccaacggctgtgtgagtaagatcttagggagatat
tacgagactggatcgatccgacccagagcaatcggtggcagcaaacccagagtagccacc
ccagaagtggttagcaagatagcccagtataaaagagagtgcccttccatctttgcatgg
gaaatccgagacaggttgctatctgagggagtctgtaccaacgacaatatccccagtgtg
tcatcaataaaccgagtgctgcgcaacctggcgagcgaaaagcaacagatgggcgccgat
ggcatgtacgacaagctcaggatgctgaatgggcaaactgggacctgggggacccggcca
gggtggtaccccggcacctcggtacctggccagccagcacaggacgggtgtcagccgcaa
gaaggaggaggaggaggagaaaacacaaactcaatcagctccaatggcgaagactcagac
gaggcccaaatgaggcttcagctgaagagaaaattacaaaggaacagaacatcttttacc
caggaacaaatagaggccctagaaaaagaatttgaacgaacacattaccccgacgtgttt
gccagggaaagattagctgccaaaatcgacctgccagaagcaagaatacaggtatggttc
tccaacagaagagcaaaatggagaagggaggaaaaacttcgaaaccagagaaggcaggcc
agtaacacacccagccacattcccattagcagtagtttcagtacgagcgtctaccagcca
atcccacagcctaccacaccagtgtcctctttcacatcgggttccatgctgggcagaacg
gacacagcattgacaaactcctacagtgcgctgccacctatgcctagttttacaatgggc
aacaacctacctatgcaaccccctgtacccagccagacatcctcctactcatgcatgctg
cccacaagtccatctgtgaatgggcggagctatgacacatacacacctccccacatgcag
acacatatgaacagccagccaatgggcacatctggcaccgcctctacaggtctcatttcc
cctggagtgtcagtcccagttcaagtacccggcagtgaacctgacatgtctcagtactgg
ccaagactacagtaa

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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