KEGG   Xenopus tropicalis (western clawed frog): 448691
Entry
448691            CDS       T01011                                 

Gene name
sumo1
Definition
(RefSeq) small ubiquitin-related modifier 1 precursor
  KO
K12160  small ubiquitin-related modifier
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
xtr03013  RNA transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    448691 (sumo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    448691 (sumo1)
   03029 Mitochondrial biogenesis [BR:xtr03029]
    448691 (sumo1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    448691 (sumo1)
Ubiquitin system [BR:xtr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   448691 (sumo1)
Mitochondrial biogenesis [BR:xtr03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Fission and Fusion factors
    448691 (sumo1)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Septins
   Septin associated proteins
    448691 (sumo1)
SSDB
Motif
Pfam: Rad60-SLD ubiquitin
Other DBs
NCBI-GeneID: 448691
NCBI-ProteinID: NP_001005111
Xenbase: XB-GENE-978491
UniProt: Q6DEP7
Position
9
AA seq 102 aa
MSDQEAKPSSEDLGDKKEGGDYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPM
NSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGGHSTI
NT seq 309 nt   +upstreamnt  +downstreamnt
atgtctgatcaggaagctaaaccatctagcgaggatctaggagacaaaaaagaaggaggg
gattatatcaaactcaaagtcatcggacaggatagcagtgaaattcactttaaggtaaag
atgacaacgcatctcaaaaagctgaaagagtcatactgtcagagacagggtgttccaatg
aattctctcaggtttttgtttgaagggcaaagaatctcagatcaccagactcctaaggag
ctcggtatggaggaagaggatgttattgaagtttatcaggaacagactgggggccactcg
acaatttaa

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