KEGG   Xenopus tropicalis (tropical clawed frog): 493422
Entry
493422            CDS       T01011                                 
Symbol
rnf146
Name
(RefSeq) E3 ubiquitin-protein ligase rnf146
  KO
K15700  E3 ubiquitin-protein ligase RNF146 [EC:2.3.2.27]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    493422 (rnf146)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     493422 (rnf146)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    493422 (rnf146)
SSDB
Motif
Pfam: WWE zf-C3HC4_3 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 zf-RING_10 Prok-RING_4
Other DBs
NCBI-GeneID: 493422
NCBI-ProteinID: NP_001008060
Xenbase: XB-GENE-974778
UniProt: Q66JE4
Position
5:67901404..67904846
AA seq 316 aa
MAGCGEVSHSANMLPTNKKLVEPCPNSAPSLSVPECAICLQTCVHPVSLPCKHIFCYLCV
KGASWLGRRCALCRQEIPEDFLDKPTLLSPEELKSASRGNGEYAWYYEGRNGWWQYDERT
SRELEDAFTKGKKSTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIVDIPKKGVAGL
RLECDAANVNLARESSADGADNMAALGASSSQPTPVLPTRLHTSLSTTASHALSHSDVTS
SLENSFAQLQIGDPVIGRNNIGEGEEGQPLINARMPAPSALLEESEPSDSNDHGSPTLQH
NSLLVPQSNRLPFGNP
NT seq 951 nt   +upstreamnt  +downstreamnt
atggctggttgtggtgaagttagccactctgctaacatgctgcccactaataagaaactg
gttgagccttgtcccaacagtgctccttcattgtctgttcctgaatgtgctatatgcctg
cagacctgtgtgcatccagttagtctaccttgtaaacacatattctgctacttgtgtgtg
aagggggcttcttggcttggaaggcgttgtgctttgtgcagacaagagattcctgaggac
tttcttgataagcctacattactgtcacctgaggaactgaaatctgcaagtaggggaaat
ggagaatatgcatggtattatgagggaagaaatggttggtggcagtatgatgagcggaca
agcagagagcttgaagatgccttcacaaaaggcaaaaagagcacagagatgttgatagct
ggcttcctctatgtagcagacttggagaacatggttcaatacaggcgtaatgagcatgga
cggcgtagaaaaatcaagagagatattgtagatataccaaaaaaaggagttgctgggcta
aggcttgaatgtgatgcagcaaatgtaaatctagcgcgagagagctcagcagatggtgcg
gacaacatggcagcacttggagcttcttcaagtcaacctacacctgtgttaccaacaagg
ctgcacacatccctcagtacaactgcaagtcatgccctttcacattctgatgttacttct
tcattggagaactcctttgctcagcttcagattggcgatcctgtgataggcaggaataat
ataggtgaaggtgaagaaggacagcctctaattaacgctagaatgccagcccccagtgct
ttgctggaagaatcagagccaagtgacagtaatgaccatggaagtcctacattacaacat
aattcacttcttgtgccacaaagtaataggctcccatttggtaatccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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