KEGG   Xenopus tropicalis (tropical clawed frog): 496760
Entry
496760            CDS       T01011                                 
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25
  KO
K10640  E3 ubiquitin-protein ligase RNF25 [EC:2.3.2.27]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    496760 (rnf25)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     496760 (rnf25)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    496760 (rnf25)
SSDB
Motif
Pfam: RWD zf-RING_2 zf-RING_11 zf-C3HC4 zf-RING_5 zf-rbx1 zf-C3HC4_2 zf-Di19 zf-RING_UBOX FANCL_C zf-ANAPC11 FANCL_d2 SLX1_C
Other DBs
NCBI-GeneID: 496760
NCBI-ProteinID: XP_002940633
Xenbase: XB-GENE-994718
UniProt: A0A8J0QSC2
Position
9:13916165..13926955
AA seq 377 aa
MAAEAEEEEESLQQELQVLESIYPDELQICRGERVVLSITLHPATGHDEETQYVRITLEL
SLPPKYPAEVPEISVKNPRGLCDDQINSIVSSLRSVAEQGVGCPILYELIEKGKEMLTDS
NIPRGHCVICLYNFQEGDSLTKTPCFHHFHSYCLGRYAQHSTEQKQMEELSVLCPVCRED
VTCDIIKLQAAPPPLHPEEIYTPDCITLEKQKELHQIYQAQLAKGGIIDIEAERNRFFIS
IQEPPPQFDAVLEPQPDEVQSPQPELEPPPPPPVESKLPCSRGHPGRQRPGYRSQHYRPV
HTDHNANSHLHHGRGRKFHGRGRPERYDLSGDGKPAISRDHDVPGRGNYRGRNFRTGAIV
QPPPRGRGEHYMKHNPL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcggctgaagcggaagaagaggaagaatccttgcaacaggagctacaggtgctagag
tctatttaccccgatgaactgcagatctgccggggagagagagtggttcttagcatcaca
ctacacccagccaccggccatgatgaagaaacacagtatgtcagaattacactggagctg
tctcttcccccaaagtatccggcagaggtaccagagatcagcgtgaaaaaccccagaggc
ctgtgtgatgatcagataaacagcattgtcagctctctgcgctccgtggctgagcagggg
gtcggctgcccaattctctatgagctgattgagaaaggaaaggagatgctgactgacagt
aatatcccccgtggccattgtgtcatctgcttatataacttccaggagggggattcactg
accaagaccccatgtttccaccatttccattcatactgcctgggtcgctatgcgcagcac
agtacagaacagaagcagatggaggagctttcagttttgtgccccgtttgccgcgaggat
gtgacctgtgacatcatcaaactacaagcagctccgccccccttgcacccagaggagata
tataccccggattgtatcaccctggagaaacagaaggagctgcatcagatttaccaggct
caactcgctaaaggagggataattgacattgaggcagaaaggaaccgttttttcatcagc
atccaagagccaccaccacaattcgatgctgtccttgaaccccagccagatgaagtgcag
tcacctcagccagagttagagccaccaccaccaccaccagtggagtccaaacttccctgc
tccaggggccacccaggcaggcaaagaccagggtacaggagtcagcactaccggcctgta
catactgatcacaatgccaacagccatctgcaccacggcagagggagaaagttccacggc
agagggagacctgaaagatacgacttgagcggggacggtaaaccagccataagtagagac
cacgatgtgccgggacgggggaactacaggggccgcaattttaggactggtgcaatagtc
cagcctcctcccagaggcagaggggaacactatatgaaacacaatcccctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system