KEGG T01011: 496796

Xenopus tropicalis (tropical clawed frog): 496796

Entry

496796            CDS       T01011

Symbol

vapa

Name

(RefSeq) vesicle-associated membrane protein-associated protein A

K06096

vesicle-associated membrane protein-associated protein A

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    496796 (vapa)
Membrane trafficking [BR:xtr04131]
Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    496796 (vapa)
Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    496796 (vapa)

SSDB

Motif

Pfam:

Motile_Sperm Cep192_D3 Cep192_D6 ASH Ig_CFAP65_4th DISC1 HYDIN_VesB_CFA65-like_Ig LIC4_C BEGAIN_coil YabA PLipase_C_C Ig-CFAP74_4th bZIP_1 MYCBP_helical

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

6:104675147..104694539

AA seq 227 aa
MSKHEQILILDPPNELKFKGPFTDVVTTNLKLRNPSDKKVCFKVKTTAPRRYCVRPNSGT
IDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPTISDMEAVWKEAKPDDLMDSKLR
CVFDMPHEQEKPTHESTKLYSCLPGTKGSSSMDDTETRKLMEECKRLQSEMIKLSDENQV
LKEETLRMRKASDKSGKMLRDQGIPIPSLVVVIAAIFIGFFLGKFIL

NT seq 684 nt +upstreamnt +downstreamnt
atgtccaaacacgaacaaatccttattcttgacccgcccaacgagctgaaattcaaaggt
ccatttacagatgtggtaacaacaaacctaaaactacggaacccatcagataaaaaagta
tgttttaaagtcaaaactacagcacctcggcgttattgtgtgcggccaaacagtggcacc
atagaccctggatccacagtcacagtttcagtaatgctacaaccttttgattatgaccca
aatgaaaagagtaagcataagtttatggtgcaaaccatttttgctccaccaacaatatca
gacatggaagctgtgtggaaagaggcaaaacccgatgaccttatggactcaaagctgaga
tgtgtatttgatatgcctcatgaacaagaaaagccaacacatgagtcaaccaaattgtat
tcatgtcttcctggaacaaaaggcagttcttccatggatgacactgaaacacggaagtta
atggaggaatgtaagcgactgcaatctgaaatgatcaaactatcagatgaaaaccaagtt
ctaaaagaggaaactttacgaatgaggaaggcatcagataaatcaggcaaaatgttacga
gatcaaggcatccctattccatctcttgttgttgtcattgcagcaattttcataggattc
tttctaggaaagttcatcttgtaa

All links

Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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