KEGG   Xenopus tropicalis (tropical clawed frog): 548920
Entry
548920            CDS       T01011                                 
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013  Nucleocytoplasmic transport
xtr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    548920 (sap18)
   03015 mRNA surveillance pathway
    548920 (sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    548920 (sap18)
   03036 Chromosome and associated proteins [BR:xtr03036]
    548920 (sap18)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     548920 (sap18)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     548920 (sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 548920
NCBI-ProteinID: NP_001016166
Xenbase: XB-GENE-481689
UniProt: Q28FL5
Position
2:complement(157763601..157767479)
AA seq 153 aa
MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYT
WMDATLKELTSLVKEVYPDARKKGTHFNFAIVYPDPKRSGYRVKEIGSTISGRKGSDDSM
TLQSQRFQIGDYLDIAITPPNRAPPPSGRMRPY
NT seq 462 nt   +upstreamnt  +downstreamnt
atggcggtggaatcgcgggtgacgcaggaggagataaaaaaggaaccggagaaaccaatc
gatagagagaagacctgccctcttctcttgagggttttcacaacaaacaacgggagacac
catcgcatggatgaattttcgaggggaaacgtgccatccagtgagctacagatctatacc
tggatggatgccacgctgaaggaattaacaagcttagttaaagaagtttacccagatgct
cggaaaaaaggaactcatttcaactttgctattgtctatccggatccaaagcgatcaggc
tacagggtgaaggagattgggagtacaatttcaggcagaaagggttcagatgactccatg
acacttcaatcacaaagatttcagattggagactatctggacatagcaattacacctcca
aacagagctccacctccttcagggcgcatgaggccctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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