KEGG   Xenopus tropicalis (tropical clawed frog): 549218
Entry
549218            CDS       T01011                                 
Symbol
commd6
Name
(RefSeq) COMM domain-containing protein 6
  KO
K22562  COMM domain containing 6
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    549218 (commd6)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Multi subunit type E3 associated proteins
    549218 (commd6)
SSDB
Motif
Pfam: COMM_domain COMM_HN
Other DBs
NCBI-GeneID: 549218
NCBI-ProteinID: NP_001016464
Xenbase: XB-GENE-963717
UniProt: Q28HC7
Position
2:126719932..126729886
AA seq 197 aa
MFDRELEAFGFEKTDDLIKIVPPDLFAELCQQSVQHLQRQRSGVDCQVIFQSFQAAGVLI
SEDELRKIIRWITTLFSTAAKYNVTCEELLSRLISKLPKQILQVIRHVWNEEGKRLSELE
KSRDLLPSGELVDFQWKIGMAVSSDSCRSLNHPYVTIELKVADYSGQITSKVFELTIPEF
QNFHKQVKEMSSVLETV
NT seq 594 nt   +upstreamnt  +downstreamnt
atgtttgatagagagctggaagccttcggttttgagaagactgatgatttgattaaaata
gtaccaccggatctctttgctgaactgtgccagcaaagtgttcagcaccttcaaaggcag
agatccggtgtagactgtcaggtgatttttcagagttttcaagcagctggtgttctaata
agtgaggatgaacttagaaaaatcattagatggataaccacgcttttcagcacagcagca
aagtataacgtgacttgtgaggagctgctgagccggttaatcagcaaacttccaaagcag
attctgcaagtcattcgacatgtatggaatgaagagggaaagcgcttgtctgagcttgaa
aagagtagagatctgctaccatctggagagcttgtagacttccagtggaaaattggaatg
gctgtgagttctgatagttgtcgctccctgaaccatccttacgtcaccatagagttaaaa
gttgcagattattctggccagattacaagcaaggttttcgagttgactattccagagttt
cagaacttccacaagcaagtcaaagaaatgtcttctgttcttgaaacagtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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