KEGG   Xenopus tropicalis (tropical clawed frog): 549637
Entry
549637            CDS       T01011                                 
Symbol
hdac3
Name
(RefSeq) histone deacetylase 3
  KO
K11404  histone deacetylase 3 [EC:3.5.1.98]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    549637 (hdac3)
Enzymes [BR:xtr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     549637 (hdac3)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     549637 (hdac3)
   HDAC complexes
    SMART complex
     549637 (hdac3)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 549637
NCBI-ProteinID: NP_001016883
Xenbase: XB-GENE-481106
UniProt: Q28DV3
Position
3:complement(27751018..27768520)
AA seq 428 aa
MAKTVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCR
FHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN
KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVI
KQVIDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTV
RNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ
TIFENLKMLNHAPSVQIHDVPSDILSYERTDEPDPEERGSEDNYSRPEASNEFYDGDHDN
DKESDVEI
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcaaagactgtggcttatttttacgatccggacgtggggaacttccattatggcaca
ggtcatcccatgaaacctcaccgattatcccttacacacagtctggttctacactatgga
ctttataagaagatgattgtcttcaaaccataccaggcttcccagcatgacatgtgccga
tttcactctgaagactacattgacttccttcagagagtgagccccaataacatgcaaggc
ttcactaagagcctaaatgccttcaatgttggggatgattgcccagttttccctggtctc
tttgaattttgctctcggtacacaggagcctctttgcagggtgcaacacagctaaataat
aagatctgtgacattgcaattaactgggctggcggactgcaccatgctaaaaaatttgag
gcatctgggttttgttatgtgaatgacatcgttattggcattcttgagctacttaagtat
catcctcgtgttctttatgtagatattgatattcatcatggagatggagtacaggaagca
ttctacctcactgacagagttatgacagtatcatttcacaagtatgggaattattttttc
cctggtacaggggatatgtacgaagtgggagcagaaagtggaagatattactgtttgaat
gttcccttaagagatggcatagatgatcaaagttataggcacttattccagcctgttatc
aaacaggtgatagatttctatcagcccacctgtattgttttgcagtgtggagcagactcc
ctgggttgtgacagactggggtgttttaacctgagcataaggggccatggggaatgcgtt
cagtatgtgaaaagcttcaatattcctttgcttgttcttggtggaggtggttacactgtg
cgtaatgtagctcgctgctggacttatgaaacgtcgctgcttgttgatgagacaattagt
gaagagctgccttatagcgaatactttgagtactttgcgccagattttacgcttcatccg
gatgttagtaccagaattgaaaaccaaaactcccggcagtatctagatcaaatcagacag
accatttttgagaacctaaagatgttgaaccatgcacccagtgttcagatccacgatgtt
ccatcggacattctgagctatgagcgcacagatgagccagatccagaagagaggggttca
gaagacaactacagcaggcctgaagcttcaaatgaattttatgatggtgaccatgataat
gacaaggaaagtgatgttgagatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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