KEGG   Xylella taiwanensis: AB672_02380
Entry
AB672_02380       CDS       T05568                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
xtw  Xylella taiwanensis
Brite
KEGG Orthology (KO) [BR:xtw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xtw03032]
    AB672_02380
   03400 DNA repair and recombination proteins [BR:xtw03400]
    AB672_02380
Enzymes [BR:xtw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AB672_02380
DNA replication proteins [BR:xtw03032]
 Prokaryotic type
  DNA Topoisomerases
   AB672_02380
DNA repair and recombination proteins [BR:xtw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AB672_02380
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 DUF4340 Toprim_2
Other DBs
NCBI-ProteinID: AXI82882
Position
complement(586476..588911)
AA seq 811 aa
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENDFAMRYDLIDKN
EKHIEAITKAAKTADGIYLATDPDREGEAISWHIAEILKERGLLKDKPMQRIVFTEITPR
AIKEAIQKPRTIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFITREYWSIHAECAHPTQHFSAKLIKLDGQKFEQFTITNGDTAAAAQLRIQQ
AAQGRLHITDVASKERKRRPAPPFITSTLQQEASRKLGFTTRKTMQIAQKLYEGIALGEE
GSVGLITYMRTDSVNLSQDALSEIRDIIARDYGTNTLPDKPNVYTTKSKNAQEAHEAVRP
TSALRTPTQVAPYLSNDEHRLYELVWKRAVSSQMIPATLNTISVDLAAGNEHVFRATGTT
VVVQGFLAVYEEGKDNKNAEDDDEGRKLPTMKTGETVPLERILTEQHFTQAPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVDMEGRSFRPTDIGRAVSKFLASHFTRYVDYDF
TARLEDELDAISRGEEEWVPLMKKFWTPFKELVEDKKDSLDKTDAGSVRMLGTDPASGKE
VSARIGRFGPMVQIGTVDDEEKPRFASLRPNQSIYSISLEEAMELFKMPRVLGEDKSQQV
SVGIGRFGPFAKRGSTYVSLKNEDDPYTIDLARAIMLINEKEEIARNRIIKDFDNSEIQV
LNGRFGPYLSDGKLNGKIPKDREPASLTLEEAQQLLTETGKPIRKNFSTKKTTTKNETRK
QATGKHTATGKAIKKMSGKTVTKQMKKHLAS
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgcccaaacaccttcttatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaagatttcaccgtcttagcctcttacgggcatgtacgcgacttggtacctaag
gaaggcgcagtcgatccagaaaacgactttgcgatgcgctacgacctgatagacaagaac
gaaaagcacatcgaagcaatcaccaaagcggccaaaacagccgacggcatctatctggca
accgacccggatcgtgagggcgaagcgatcagttggcacatcgccgagatccttaaagaa
cgtggattattgaaggacaaaccgatgcagcgcatcgtgttcaccgagatcaccccacgc
gcgatcaaggaagcaattcaaaagccgcgtacgattgccagcgatctggtagacgcccag
caagcacgtcgtgcattggactacctggttggcttcaatctctcaccagtgctgtggcgc
aaagtacaacgcggtttatcagcaggccgtgtgcaatcgccagcactgcgcatgattgtc
gagcgcgaagaggaaatcgaagccttcatcacacgcgaatattggagcatccatgccgaa
tgtgcgcatcctacccaacacttcagtgccaaactcatcaaattggatgggcaaaagttc
gaacaattcaccattaccaacggcgacactgccgcagccgcacaactaaggatccaacaa
gccgcacaaggacgcctgcacatcaccgacgttgccagcaaagaacggaaacgacgccct
gcgccgcccttcatcacatccacattacagcaggaagcctcacgcaaactcggtttcacc
acacgtaaaacgatgcagattgcacagaaactttacgagggcatcgcactgggtgaggag
ggcagcgtcggtctgattacctacatgcgcaccgactcagttaacctgtcgcaggatgct
ctatcggaaattcgcgacatcatcgcacgcgattacggtaccaacacactcccagacaaa
cctaacgtctacaccaccaagtccaagaacgcgcaggaagcgcacgaagcggtacgcccg
acctcagcattgcgcacgccgacacaggttgcaccgtatctttccaacgacgaacaccgg
ctatacgaactggtgtggaaacgcgcagtgtcctcccagatgatcccggcgacactcaac
accatcagcgtcgacctggccgctggcaacgaacacgtatttcgtgccaccggaaccacc
gtagtggtacaaggtttcttagccgtgtacgaagaaggcaaggacaacaagaacgctgaa
gacgatgacgaaggccgcaaactccccacaatgaaaaccggggaaactgtgccgctggaa
cgtatcttgaccgaacagcactttacacaggcaccaccacgttacaccgaagccgcgttg
gtcaaagcactcgaggaatacggcatcggtcgtccatcgacttacgcctcgatcatccaa
acgctgctattccgcaagtacgtagacatggaaggccgcagtttccgcccgacggacatt
ggccgcgccgtgtccaaattcctcgcaagccactttacccggtacgtggactacgacttc
accgcacgcctggaagatgaattagatgcgatctcgcgcggcgaggaagaatgggtcccg
ctgatgaaaaaattttggactccattcaaggaactggttgaagataagaaagattcactc
gacaaaaccgacgctggcagcgtacgcatgctcggcaccgaccccgccagcggaaaggaa
gttagcgcacgcattggccgcttcggaccgatggtgcaaattggcaccgttgatgacgaa
gaaaagccgaggtttgcttcgttacgccccaaccaaagcatctactccatcagcctcgaa
gaggcgatggaactattcaaaatgccgcgtgtgcttggggaggacaaaagccagcaagtc
agtgtcggcatcggccgcttcggtccgtttgccaagcgcggcagcacttatgtctcgctg
aagaatgaggatgatccttacaccatcgacttggcacgcgcaattatgctcatcaacgag
aaggaagaaatcgcgcgcaatcggatcatcaaagacttcgacaacagcgagattcaggta
ctgaacgggcgcttcggcccctacctgagcgatggcaaactcaacggaaaaatccccaag
gatcgcgaaccagcctcactgactctcgaagaagcacagcaattactcacagaaaccggt
aaaccgatacgaaaaaacttcagtacgaagaaaaccacaaccaagaacgagactcgcaaa
caagcaaccggcaagcacaccgcaacaggaaaggcaatcaaaaaaatgtcaggcaagacc
gtaacgaagcaaatgaaaaaacaccttgcctcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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