KEGG   Xanthomonas vasicola pv. vasculorum: C7V42_11610
Entry
C7V42_11610       CDS       T05388                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
xva  Xanthomonas vasicola pv. vasculorum
Pathway
xva03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xva00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C7V42_11610 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xva02044]
    C7V42_11610 (clpV)
Secretion system [BR:xva02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C7V42_11610 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Zeta_toxin Sigma54_activat AAA_7 AAA_14 NACHT AAA_25 TniB nSTAND3 ATPase_2 DUF815 AAA_18 Hpr_kinase_C AAA_30 Cyclin_N CbiA EccE Clp_N
Other DBs
NCBI-ProteinID: AVQ07162
Position
complement(2499783..2502485)
AA seq 900 aa
MADISRAALFGKLNKTTYRGIESATAFCRLRGDREVELLHWLHQLLQAQDGDLHRIVRRF
SLDASRLAQDLTAALDRLPRGGGHFDLSGSVEDAVERAWVHCTLRYGRQRIRGGDLLVAI
LHTRSLRNGLLAMSSEFGKLRAETLADDLDDIVAGSPEEDASDLAAAVAPVGTGATGGAA
ALALYTVDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEGF
AQRIARGDVPPALKKVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDE
AHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVD
EPDEAKAVRMMRGVASTMEQHHRVQILDEALEGAVKLSHRYIPARQLPDKSVSLLDTACA
RVAVSLHATPAEVEDSRRRIESLETEHAIIERERAIGVVVEERAAVCASLLESEHGRLRE
LEQRWAAEKVLVDELLSLRARLRGGNAPVEGTVSALEVDAGHIAIGNTAVIEAPVHVDRD
TLLARLQLVQAQLAALQGQSPLILPTVDYQAVAGVVADWTGIPVGRMARNEIDTVLRLPE
LLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLLAGTSGVGKTETALALAETLYG
GEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHP
DVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIANLCKDPELLPDPEGMAKA
LRAPLLKVFAPALLGRLVAIPYYPLSNAMLGQIVRLQLNRIRKRIEERYRISFEYDDSVV
ELVVSRCTESESGGRMIDAILTNSMLPEISRELLVRTIAGEECFRVNVRVAESGLIHDFG
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggcagacatcagtcgcgccgctttgttcggcaagctcaacaaaaccacctatcgcggt
atcgaatcggccactgcgttctgcaggctacgtggcgaccgcgaagtggaactgctgcac
tggctgcatcagttgctgcaggcgcaagacggcgacttgcaccgcatcgtgcgccgtttt
tcgctggatgcgtcgcggcttgcacaggacctgaccgcggcgctcgatcgcctgccgcgc
ggcggcggacacttcgatctgtcgggcagcgtggaggatgcagtggagcgcgcctgggtg
cactgcacgttgcgttacggacggcaacgcatccgtggcggcgatctgctcgtggcgatc
ctgcacacgcgcagcctgcgtaatgggttgctcgcgatgtcgagcgagttcggcaagctg
cgcgcggaaacactggcggacgatctggatgacatcgtcgccggttctccggaggaggat
gccagcgaccttgcggcggctgtcgcccccgttggaactggtgcaacaggtggtgctgcg
gcgcttgcgctgtatacggtcgacctcaccgcacaagcgcgcgagggcaagctcgacccg
atcatcggccgcgacgatgagatccgccaagtcgtcgacatcctgatgcgtcgccgccag
aacaacccgatcctggttggcgaagccggcgtcggcaaaaccgcggtggtggaaggcttc
gcacagcgcatcgcgcgcggcgatgtgccgcccgcgttgaagaaggtgcaactgcgcacg
ctggacgtgggcctgttgcaggccggcgccagcatgaagggcgaattcgagcagcgcctg
cgcgcagtcatcgacgaagtgcaggccagccccaagccgatcatcctatttgtggatgaa
gcccacaccctggtcggcgccggtggcgcggccggtaccggcgatgcggccaatctgctc
aagccggcactggcacgtggcacgctacgcacggtgggcgccaccacctttgccgagtac
aagaagtacatcgaaaaagaccccgcgctgacgcggcgcttccaggccgtgcaggtggac
gaaccggacgaagccaaggccgtgcgcatgatgcgtggtgtcgcctcgacgatggaacag
caccaccgcgtgcagatcctcgacgaggcgctggaaggggcggtcaagctcagtcaccgc
tacatcccggcgcggcaactacctgacaagtcggtgagcctgctcgacaccgcctgcgcg
cgtgtcgcggtgagcctgcatgccacgcctgcggaagtggaagatagccgccgccgcatc
gaatcgctggagaccgaacatgccatcatcgagcgcgagcgtgcgattggcgtcgtggtg
gaggagcgtgctgccgtttgcgccagcctgctggaaagcgagcacggccgcctgcgcgag
ctggaacagcgctgggccgccgagaaggtattggtcgatgaactgttgtcgctacgcgcc
cgactgcgtggtggcaacgcgccggtggaagggaccgtcagtgcgttggaagtcgatgcg
ggacacatagcgatcggcaacactgccgtgatcgaagcacccgtacacgtggatcgcgac
acgctattagcgcgtctgcaattggtacaggcccaactggcggcactacagggccaatcg
cccctgatcctgcccacggtggattaccaagccgtggccggggtggtcgccgactggacc
ggcatcccggtcgggcggatggcgcgcaatgaaatcgacaccgtgctgcgcctgcccgaa
ctactggccaagcgcgtgatcggccaggaccatgccatggaaatgatcgccaagcgtatc
cagaccagccgcgccggcctggacaacccggacaaaccgatcggcgtgttcctgctcgcc
ggcacctccggcgtcggcaagaccgaaaccgcactcgccctggccgaaaccttgtatggc
ggcgaacaaaacctgatcaccatcaacatgagcgagtaccaagaggcgcacaccgtctcc
tcgctcaagggcgcaccacccggctacgtcggctacggcgagggcggtgtgctcaccgaa
gcggtgcgccgcaagccgtactcggtggtattactggatgaagtggaaaaagcccacccc
gacgtacacgaattgttcttccaggtcttcgacaagggctggatggaagacggcgaaggc
cgccgtatcgacttccgcaacaccttgatcatcctgaccagcaacgccggcaccgatctc
atcgccaacctgtgcaaggacccggaactcctaccggatccggagggcatggctaaggcg
ctccgcgcgccgttgttgaaggtgtttgcgccagcgttgctcgggcggctggtggcgatt
ccgtattacccactgagcaacgccatgctcggccagatcgtgcggctgcagttgaaccgc
atcaggaagcggatcgaggagcgctacaggatttcgttcgagtacgacgattcggtggtg
gagttggtggtctcgcggtgcaccgagagcgagtcgggtggacggatgatcgatgcgatt
ttgactaactcgatgttgccggagatcagtcgggaattactggtgagaacgatcgctggc
gaagagtgctttcgggtaaacgtgcgcgttgcggagagtgggctcatccatgacttcggc
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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