KEGG   Xanthomonas vesicatoria: BJD12_09415
Entry
BJD12_09415       CDS       T04741                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
xve  Xanthomonas vesicatoria
Pathway
xve03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJD12_09415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xve03400]
    BJD12_09415
Enzymes [BR:xve01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BJD12_09415
DNA repair and recombination proteins [BR:xve03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BJD12_09415
SSDB
Motif
Pfam: DUF4130 UDG
Other DBs
NCBI-ProteinID: APP75433
UniProt: F0BDF3
Position
complement(2162716..2164155)
AA seq 479 aa
MFSAEVEPPWSFEAWRALARAGWCAQVQPDDVAWNGGAQGGLLMGQGLLELPVIMPPPRV
SANFMQLAASVLCHRDPQRHAVLYRVLWRIASGEKALLERVTDVDVHRLAQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFVAWFEPEHCIVDRVAPFFARRFAGMRWAILTPYRSVRWDGE
ALSFGDAAVRSQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEAALLP
ELIREAGVRVREMAERAPEPVRRRVPMTPAPTPDVATQSLAQLRTAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQAFYVTNAVK
HFRFEQRGKRRLHRNPERAHVQACSGWLQAERAQLRPAQIVCLGATAAQAVLGSGFRLMQ
QRGQWQRLDDGTPVLATVHPSWVLRQGSEVAREEGYRGFVQDLRQLLTPPRAASDLANA
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgttcagcgctgaggtcgaaccaccgtggagttttgaagcatggcgtgcgttggcgcgg
gcagggtggtgcgcgcaggtgcagccggatgatgtggcatggaacggtggggcgcagggc
gggttgttgatggggcaggggctgctggagctgccggtgatcatgccgccgccgcgcgtg
tcggcgaacttcatgcagctggctgcgtcggtgctgtgtcatcgcgatccacagcggcat
gcggtgctgtaccgggtgttatggcgcatcgcctccggagaaaaagcgctgttggagcgc
gtcaccgatgtggatgtgcaccgtcttgcgcaatggcaaaaggcggtgcagcgcgatacg
cacaagatgaaggcatttgtgcgctttcggcgtttgcctggggaagaggaagatttcgtg
gcctggttcgaacccgagcactgcatcgtggatcgggtggcgcccttttttgcccggcgg
tttgccggcatgcggtgggcgatcctcacgccataccgcagcgtgcgctgggatggcgag
gcgttgtcgttcggcgatgcggcggtacgttcgcaggtaccggccgacgacgcgcaggaa
accttgtggcgcacgtactacgcgcacatcttcaatcctgcgcggctcaaccccaccatg
atgcgtcaggaaatgccgcagaaatactggaaaaacctgcccgaagcggcgctgttgcct
gagttgatccgagaagccggggtgcgggtgcgcgagatggccgagcgtgcgcccgaaccg
gtgcggcgacgcgtaccgatgacacctgcgccgacgccggacgttgcaacccaaagcctg
gcgcagctacgcactgcggcgcgcgattgtcgtcgctgcgagctgtggcagccggccacg
cagacggtgttcggcgaaggaccggacgatgcatcggtgatggtcatcggcgaacaaccc
ggcgacgaagaggatctgagtgggcgtccgttcgtgggcccggccggacgcctgttcacc
atggcgctcggcgaactgggcgtggaccgtcaggcgttctacgtgaccaatgcggtcaag
cattttcgtttcgagcaacgcggcaagcggcgcctgcatcgcaatcccgagcgtgcgcat
gtgcaggcatgcagcggttggctacaggccgagcgcgcgcagctgcggcccgcgcagatc
gtctgtctgggagcaaccgccgcgcaggcagtgctggggtctggctttcgcttgatgcag
cagcgtgggcagtggcagcggttggacgacggcaccccggtcttggcgaccgtgcacccg
tcctgggtgctgcggcaaggctccgaggtggcgcgcgaagaaggctaccgcggctttgtg
caggacctccggcagttgttgacgccgccgcgtgcggcaagcgatctggccaacgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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