KEGG   Xylanimonas protaetiae: ET471_17235
Entry
ET471_17235       CDS       T05815                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
xya  Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:xya00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xya03019]
    ET471_17235
   03009 Ribosome biogenesis [BR:xya03009]
    ET471_17235
   03036 Chromosome and associated proteins [BR:xya03036]
    ET471_17235
Enzymes [BR:xya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ET471_17235
Messenger RNA biogenesis [BR:xya03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ET471_17235
Ribosome biogenesis [BR:xya03009]
 Eukaryotic type
  90S particles
   RNase
    ET471_17235
 Prokaryotic type
  rRNA processing factors
   ET471_17235
Chromosome and associated proteins [BR:xya03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ET471_17235
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: QAY71945
UniProt: A0A4P6F8R1
Position
complement(3715405..3716118)
AA seq 237 aa
MRPAPTALLEKLGVHLDPELLVLALTHRSFAHEAGGIPHNERLEFLGDSVLGVVVTEALY
RRHPDVSEGELAKMRAATVSQRALAAVARELDLGAYVLLGKGERRTRGFDKDSILSDTVE
AIIGATYISHGLETARALVHRLVDDTLDAAAGLGAGLDWKTSLQEACAERGFAAPAYQVD
AEGPEHARTFHAQVVAGPVMGLGHGSAKKHAEQEAAEEAYRALVALPVDAAPAEPGA
NT seq 714 nt   +upstreamnt  +downstreamnt
atgcggccggcgccgaccgctcttctcgagaagctcggggtccacctggaccccgagctt
ctcgtgcttgccctcacgcaccgctcgttcgcccacgaggccggcggcatcccgcacaac
gagcggctcgagttcctgggcgactccgtgctgggcgtcgtcgtcaccgaggcgctgtac
cgccgccaccccgacgtgagcgagggcgagctggcgaagatgcgcgcggccacggtgtcc
cagcgggcgctcgccgcggtggcgcgtgagctcgacctcggcgcgtacgtgctgctcggc
aagggcgagcggcgcacgcgcggcttcgacaaggactcgatcctctccgacaccgtcgag
gcgatcatcggcgcgacgtacatctcgcacggcctggagacggcgcgcgcgctggtccac
cgcctggtcgacgacacgctcgacgccgccgccggcctgggcgccgggctcgactggaag
acgtccctccaggaggcctgcgccgagcgcgggttcgccgcaccggcctaccaggtcgac
gccgagggccccgagcacgcgcggaccttccacgcgcaggtcgtggccggcccggtcatg
ggcctgggccacggctccgccaagaagcacgccgagcaggaggccgccgaggaggcgtac
cgcgccctcgtcgcgctgcccgtggacgccgccccggccgagccgggtgcctga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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