KEGG   Yersinia aldovae: AT01_3612
Entry
AT01_3612         CDS       T03605                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
yal  Yersinia aldovae
Pathway
yal00300  Lysine biosynthesis
yal01100  Metabolic pathways
yal01120  Microbial metabolism in diverse environments
yal01230  Biosynthesis of amino acids
Module
yal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:yal00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AT01_3612 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yal01002]
    AT01_3612 (dapE)
Enzymes [BR:yal01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     AT01_3612 (dapE)
Peptidases and inhibitors [BR:yal01002]
 Metallo peptidases
  Family M20
   AT01_3612 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: AJJ62694
Position
complement(3970408..3971535)
AA seq 375 aa
MICPVIDLAQQLIKRPSLSPNDAGCQEIMIQRLEAIGFTVEPMNFGDTLNFWAWRGEGET
LAFAGHTDVVPTGDESHWSSPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPN
HNGRLAFMITSDEEAKAINGTVKVVNALMARNERLDYCLVGEPSSTDKVGDVVKNGRRGS
ITANLHIQGIQGHVAYPHLADNPVHRAMPALNELVATQWDEGNEFFPATSMQIANLHAGT
GSNNVIPGEFYVQFNFRFSTELTDSIIKQRVEALLERHQLKYTLEWVLSGQPFLTPRGAL
VDAVVNAVEHYAEITPQLLTTGGTSDGRFIALMGAQVVELGPVNATIHKVNECVHAADLQ
LLSRMYQRIMEQLIA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgatctgtccggtaatcgacctggcccaacaactcattaaacgcccgtcgctcagccct
aatgatgcaggctgccaggagatcatgattcagcgtttagaagcgatcggttttactgtt
gaaccgatgaattttggcgatacgcttaacttctgggcatggcgtggcgaaggtgaaaca
ctggcgtttgccggtcacaccgatgtggtgccaaccggtgatgaaagccactggagcagc
ccaccttttgagccggctattcgcgatggcatgttatatggccgtggtgctgctgatatg
aaaggctctctggccgcgatggtggtggccgccgagcgctttgtcgcggcccatccgaat
cataacggccgcctggcctttatgataacctctgatgaagaggccaaagcaattaatggc
acggtaaaagtggttaacgctctaatggcacgcaatgagcggctggattattgtctggtg
ggcgaaccttccagtaccgataaagtcggtgatgtggtcaaaaatggccgccgtggttct
atcacagccaatctgcatattcagggtatacaggggcatgtggcctacccccatctggcg
gataatccggttcatcgcgccatgccagccctaaatgaactggttgctacccaatgggat
gaaggtaatgagtttttcccggcaaccagtatgcagattgccaatttacatgctggaacc
ggcagcaataatgttattcccggtgagttctatgtgcagttcaatttccgtttcagcact
gaactgaccgatagcataattaaacaacgggttgaagcgctgctggaacgccatcaactg
aagtacacccttgagtgggtgttgtccggccagccattcctaacgccacgcggcgcgctg
gtggatgcagtggttaacgccgttgaacattatgccgagataacgccacagctactaacc
accggtggcacgtcagatggccgttttatcgcgttaatgggggcacaagttgtcgaactg
gggccggtcaatgccactatccataaagttaatgagtgcgttcatgcagcagatttacaa
ctgctgagtcgaatgtaccagcgcatcatggagcaactcatcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system