KEGG   Yersinia aldovae: AT01_587
Entry
AT01_587          CDS       T03605                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
yal  Yersinia aldovae
Pathway
yal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AT01_587 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yal03400]
    AT01_587 (ruvB)
Enzymes [BR:yal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT01_587 (ruvB)
DNA repair and recombination proteins [BR:yal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AT01_587 (ruvB)
    RecFOR pathway proteins
     AT01_587 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 nSTAND3 TIP49 AAA_3 AAA_16 Mg_chelatase AAA_14 AAA_18 AAA_2 Sigma54_activat Rad17 AAA_28 RNA_helicase AAA_17 NTPase_1 AAA_24 NB-ARC TsaE Bac_DnaA AAA_19 Sigma54_activ_2 ABC_tran IstB_IS21
Other DBs
NCBI-ProteinID: AJJ64299
Position
complement(632402..633406)
AA seq 334 aa
MIEADRLISASVISDEESIDRAIRPKLLAEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVARSAKCLGLELTAEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGDVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGIAREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagcagaccgcctgatctctgccagtgttatcagtgatgaagagagcattgac
cgggctatccgtccgaaactgttggctgaatatgtcgggcaaccgcatgttcgcgaacaa
atggaaatctttattcaggcggcaaagcagcgtggtgatgcactggaccatgtgctgata
ttcgggcctccggggttgggtaaaaccacattggctaatattgttgccaatgaaatgggg
gtcaatctgcgtaccacgtcagggccggtattggaaaaagccggtgatttagccgcgatg
ctaaccaatctcgaaccgcacgatgtgttgtttattgatgaaatccaccgcttgtcacca
gtagttgaggaaatcctctatccggcaatggaagattatcaactggatatcatgattggt
gaaggcccggctgcacgttccatcaaactcgaccttccgccgtttaccttaattggtgcc
accacccgcgccggttctttaacctctccgctgcgtgaccgctttggtattgtgcagcgt
cttgaattttatcaggtggccgatttagaacatatcgtcgcgcgcagtgccaagtgtctg
gggctagaactaacggctgaaggggcgcaccaactggctcgccgctccagaggaaccccg
cgtattactaaccgcctgttgcgtcgtgtgcgtgatttcgctgaggtgcgggccgatggc
gctatcaatggcgatgtggcgatgaaagcactggatatgctgaatgtcgatgctgaaggc
ttcgattttatggatcgtaaattattgctggccgttatcgataaatttatgggtgggccg
gtaggattggataacctggcagccgcgattggcgaggagcgggaaaccattgaagatgtg
ctggagccgtatttaatccaacaaggttttattcagcgtacaccgcgcgggcggattgcc
accaaccatgcctataaacactttggtatcgcccgcgaagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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