KEGG T03739: YE5303

Yersinia enterocolitica (type O 5) YE53/03: YE5303_08331

Entry

YE5303_08331      CDS       T03739

Symbol

xseA

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

yee Yersinia enterocolitica (type O:5) YE53/03

Pathway

yee03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:yee00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    YE5303_08331 (xseA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yee03400]
    YE5303_08331 (xseA)
Enzymes [BR:yee01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     YE5303_08331 (xseA)
DNA repair and recombination proteins [BR:yee03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     YE5303_08331 (xseA)

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon

Other DBs

NCBI-ProteinID:

CCQ39544

Position

complement(1268425..1269801)

AA seq 458 aa
MSQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ
LAAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD
APLQIVRAIQLANLRGECDVLIVGRGGGSLEDLWSFNDERVVRAIFNSRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQQFTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLGRRTERLQQRLVQAQPQGQIHRY
NQRVQQQEYRLRQALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGSLLKTT
KQVHTGDKLTTRLQDGWVESEITQIKVAKKPRQRKAAN

NT seq 1377 nt +upstreamnt +downstreamnt
atgtcacaatcttccgcgtcatcaatttttaccgtcagccgccttaatcagacggtgcga
caactgctggaaatggaaatgggccaaatttggctcactgccgagatttccaatttctct
cagccttcgtcgggtcactggtatttcaccttaaaagacgatcgggcgcaggtgcgctgc
gcgatgtttcgtaacaccaatcgtcgtaccacttttcgcccacaaaatggccaacaggtg
ttagtcagagcatcaattaccctgtatgaaccgcgtggtgactaccaattaattgccgaa
agtatgcaacccgccggcgatggattgctgcaacagcaatttgaacagcttaaacagcaa
ctggccgctgaaggacttttcgaccaaagccacaagcaacctctgcccagcccagccaaa
caagtgggggtgataacctcatccagtggtgctgctctacacgatgttttgcaagttttg
caacgccgtgacccttcacttcccgttattatttacccgacagcagtacaaggtgctgat
gctccattgcagatagtccgagccattcaactggcaaatctgcggggggaatgtgatgtg
ttgatcgtcgggagaggtggcggctcgttggaagacttgtggagttttaatgacgagcgg
gttgtccgcgctatttttaatagcaggattcccattgtcagtgctgtcggccatgaaact
gatgtcactatcgcggacttcgttgccgatttacgcgccccaaccccgtcagccgccgcc
gagctagtcagccgcaaccaaatagagttggtccggcaaattcaggggcagcagcagcgc
atggaaatggcgatggattattatctggcgcagcgcaatcagcaattcacccgcctcgag
catcggctgcaacagcaacatccgcatttacgattggctcgtcagcaaacactgctgttg
aagttacaacgccggctggaagatagcgcgcaaaaccaaattcgcctattaggtcgacgc
actgaacggctgcaacaacggctggttcaagctcaaccgcaaggacagatccatcgctat
aatcagcgggtacaacagcaggagtaccgcttgcgtcaggcattagagcgccagttgaat
ggctatcgtcaacgttttggcatcgcctgttcacaattggaggcggtcagcccattggca
acactagcccgcggctacagcgtaacgcagaccccagagggcagcttactcaaaaccacg
aaacaagtgcatactggcgacaagctaaccacccgactgcaagatggctgggtggaaagt
gaaatcactcaaatcaaggtagccaaaaagccccgtcagcgtaaagccgctaactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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