KEGG T03890: FORC2

Yersinia enterocolitica FORC_002: FORC2_0840

Entry

FORC2_0840        CDS       T03890

Name

(GenBank) exonuclease V subunit gamma

K03583

exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]

Organism

yef Yersinia enterocolitica FORC_002

Pathway

yef03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:yef00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FORC2_0840
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yef03400]
    FORC2_0840
Enzymes [BR:yef01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FORC2_0840
DNA repair and recombination proteins [BR:yef03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FORC2_0840

SSDB

Motif

Pfam:

Exonuc_V_gamma RecC_C TTc_toxin_rep

Other DBs

NCBI-ProteinID:

AKF36987

Position

940103..943474

AA seq 1123 aa
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWFESWERGQLIDNLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIRTLLESDVCPTGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESVEVKLFRDPEQAEQLFNADGEQDLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGVQHDMLELEDHAIIGTTPETLAH
SHQKRVLDLRDRSLSIHVCHSPQREVEVLQDNLLRLLEADPELTPRDIIVMVADIDSYTP
YIQATFGNATGERYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPVLA
NKFGITEDGLRRLRQWVDESGIRWGLDDDNVRELSLPATGQHTWHFGLTRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSESRSLSEWLPLCRQLLDTFFE
PDNDTEAVLVLIEQQWQKVISYGIAAQYPDIVPLNLLRDELASRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYISQSYHLPGDEELSADDSAKRVIQHL
LCWHARMPFAAENFTQDSELQSYAAEWLPAAESRGAAHPEFNQPLPPEPLPEITLDELIR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLNRYQFNTQLLNALIEESDINTVFT
RARAAGNLPYGSFGELYWENQQEEMLPLAEQIRTERKESHSIELNIESGDTTLTGWMHQI
QEDGLVRWRPAALTAVDGLLLWIEHLVYCAAGGEGESRMYGRKGTAWRYAPLDCDEARQY
LQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDRESGQILWDEEIQTKARMKLLQVWQGDQ
RIAGEGEDNYIQRVFRLMDNQHLDMILNETERYLLPIARHNKA

NT seq 3372 nt +upstreamnt +downstreamnt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctaacaactgcgctg
atagaacgagaaccgttggataacccttttcagcaagaagtggtactggtgcaaagccca
ggtatggcccaatggctacaaatgcaattggctcaacaatttagcattgcagctaatatt
gaatttccattgcctgcgacctttatctgggaaatgtttacccgcgtgttacccggcatc
ccaaaagaaagcgcatttagtaaagatgccatgacatggaaactcatgtggttattgcct
gacctattggagaatccggtattttctgcgatgaaacgctatttaagtgatgatagcgat
aaacgtaaaattcaccaacttgcggcacgagtcgctgacctttttgaccaatatctggtg
taccgcccagaatggtttgagagttgggaacgaggtcaacttattgataatttggatgat
gcccagcagtggcaagctttactgtgggttgaattaacgcgctatacccgccaattagaa
caaccggagtggcatcgcgccaatctctatcagcgttttattcgcacacttctcgaatcc
gatgtttgtccgacagggctgcccaaacgagtattcatctgtggcatatccgctttaccc
ccaatctatttacaggccttacaagcactgggtaaacacattgatatccatttgatgttt
actaatccgtgccgttatttctggggagacattcaggattatgcttttctggccaagctg
caaagccgaaaacgcagacattatcgtgagtcggtggaagtaaaactgttccgtgaccct
gagcaggcggagcaactatttaatgctgatggtgaacaagaccttagtaacccgttatta
gcttcatgggggcgacttggtcgtgaccacatgtatctgttatcccaggttgatgagatc
caagaggttcatgcatttgttgatatcgaacccgataacctattacatggtgttcaacac
gatatgctggagcttgaagaccacgccattattggtactacgccagagacattagcgcat
agccaccaaaagcgagtattagatctcagggatcgctccctaagcatacacgtctgccac
agccctcagcgcgaagttgaagtcttacaagataatctgctgcgattattggaggctgac
cctgagctgactccgcgtgacattattgtcatggtcgctgacattgatagctataccccc
tatattcaggccacatttgggaatgctacaggggagcgctatttgccatttgcgatttca
gaccgcaaggctagccaggcacatcctgcacttcaggcttttatctctctacttgatttg
ccccagagccgttttacttctgagcaggtattagccctgctggaagtgcctgttttagcc
aataaatttggtattaccgaagatggattgcgtcgtttgcggcaatgggttgacgagtca
ggtatccgctggggattagatgatgacaatgtgcgtgagttgtctctgcccgcaaccggt
cagcatacctggcattttggcctgactcgtatgctgctgggttatgctatggacagcaat
gccggtgactggcaaggggttttgccctatgacgaatccagtggtttagcggctgagctt
gccgggcaattagcggatatgttgatgcaattgagccagtggcgacagcaattgagcgaa
tctcgttcactcagtgaatggctaccattatgccgtcaattattagataccttctttgag
cccgataatgatactgaagcggtgctggttttgattgaacagcaatggcagaaggttatc
agctatggtattgctgcccaatatccggatatcgtgccactgaatctgttacgggatgaa
ctggcttcgcgcctggacaatgaacgaattagccagcgtttcctcgcggggccaatcaat
ttctgcacactgatgccgatgcgttcaatcccgtttaaagtggtgtgcttattggggatg
aatgatggtgtttacccacgaacactaccgccgttaggttttgatttgatggctaaacag
gttcggcgcggtgaccgtagccgccgtgatgatgaccgctatctgttcctcgaagcatta
ctctccgcccagcagcagctctatatcagttatatcgggcgctcgattcaagacaacagt
aagcgctatccttcagttctggttagcgagttgattgaatacatttcacaaagttatcac
ttgccaggtgatgaagaactcagtgcagatgacagtgccaaacgggtcatacaacattta
ctctgctggcatgcgcgtatgccgtttgcagcagagaattttacccaagatagtgaatta
caaagctatgccgctgaatggttacctgctgctgagtccagaggggcggcacacccagag
tttaatcagcctctgccaccagaacccttacctgaaatcactcttgatgaattaatccgc
ttctatcgccaccctgtgagggcttttttccaactccggttgggggtgaatttcgttatt
gaagaaacggagctacctgatgaagaaccttttactttggataacctcaaccgttatcag
tttaatactcaattattgaatgcattgatagaagaaagtgatatcaatactgtcttcacc
cgtgcccgtgcggcgggcaaccttccttatggttctttcggcgagctttactgggaaaat
cagcaagaagaaatgctgccattagctgaacaaattagaactgaacgcaaagagagtcac
agtattgagctaaacattgagtctggggataccaccctgactggatggatgcatcaaatt
caggaagatggcttagttcgttggcgaccagcggcacttacggcggttgatgggctttta
ttgtggattgaacatttggtgtattgcgccgcaggcggtgagggtgaaagccggatgtat
gggcgtaaaggcactgcatggcgttatgcgccactggattgcgatgaagcacggcaatat
ttacagcagttaatcagtggctatcagcaaggtatgtgcgaacctttactactactgagt
aaaagcggttgggcatggttgagtcagtgttttgatcgcgagtctggtcaaattttgtgg
gatgaagaaatacaaaccaaagcccgaatgaaacttttacaggtttggcaaggtgaccaa
cggattgccggagagggtgaggataactatatacaaagggtattccgcctgatggataac
caacatctcgacatgatattaaatgaaactgaacgttatttattaccaatagctcgccat
aataaggcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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