KEGG   Yersinia enterocolitica FORC_002: FORC2_0842
Entry
FORC2_0842        CDS       T03890                                 
Name
(GenBank) exonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
yef  Yersinia enterocolitica FORC_002
Pathway
yef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FORC2_0842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yef03400]
    FORC2_0842
Enzymes [BR:yef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FORC2_0842
DNA repair and recombination proteins [BR:yef03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FORC2_0842
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11
Other DBs
NCBI-ProteinID: AKF36989
Position
946462..950091
AA seq 1209 aa
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGEAAFRRPLMVEEI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDDPMHQALLAEIIDLSEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEHTLVQDELPLRRQACADFWRRHCYPLPLTI
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPGDDETIFSRHQQIVVQIDAVKAQWRAA
APELEALISGSGVDKRSYSARYLPSWLGKVGSWAEQETGDYQLPKELEKFRQSVLFEKTK
KGEAPQHDVFHAIDRIFEQPLTLRDLILARAISEIRISVQQEKRQRAELGFDDLLSKLDA
ALQQAGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQEECGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVDVPFLFKQIPFINVVP
AQKNKQLSFEIKGKKQPAMSFWLQSGDGVGVSEYQQLMARQCAAQIRDWLTAGQKGLAQL
VTATSSRPVKASDITILVRSRAEAALVRDALSALAIPSVYLSNRDSVFDTAEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDELNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREIMAQRHLAENLLATQGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSIGIAPLIKGGRKKQGESDMHLSALGY
LVQQGQAGDAQYLADKLAQLAALADGEISVSQAGQLDETPWLPQQDELPALAARQFSRQI
HDFWRVTSYSGLQQHGSSKSVASQALSVPLQELLPRLDTDAVGEQVLITEPQLTPHTFPR
GAAPGTFLHDLLEPLDFSQSIEQDWLTEQLQQQGFGEHWSSMLYQWLTDIVQTPLNETGV
TLAQLTPQSKQAELQFYLPIDTLLQARELDTLIKHYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTHDAMAQAMAEHRYDLQYQLYTLALHRYLRHRLG
HYDYQRDFGGVIYLFLRGVDKQHPGNGIFSCRPERELIERMDCLFSGREVGPHISDNSGM
AITGEGTSI
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgacatcaatgactccccagcggctggaaccgctaacgctccccttgtatggcgagagg
ctaattgaagcttccgctggtacaggtaagacttttaccattggggttctttatctcaga
ttgttgcttggcttaggcggggaagcagcgtttcgtcgccccttaatggtcgaggaaatc
ctggtggtgacctttaccgaagcagcaactgaggagttgagggggcgaattcgtgacaat
attcatgagttacgtatcgcctgcgtacggggagtcagtgatgatccaatgcatcaggct
ttgttagctgaaatcattgatttgagtgaggccgcagcgcaattactggcagctgagcgc
cagatggatgaagcggcaatttatactattcacggtttttgtcagcgaatgctggctaac
aatgcctttgaatcgggcatcttattcgaacataccttggtgcaagatgagctgccatta
cgcaggcaagcttgcgccgatttctggcggcgtcattgctatccgctcccgttgactatt
gccagagcggttagccaggagtggagtgggccagaggcattacttaaagatctttctgct
tacttacaaggtgaaacgccaaaatttcgacaagcgcctggtgatgatgaaacgatattc
agtcgacatcagcagatagtggtacaaattgatgcagttaaggcgcaatggcgcgcagct
gctccagagttagaggcgttgattagtggttctggtgttgataaacgcagctacagtgct
cgatatttacctagctggttaggaaaagtcggtagctgggctgagcaggaaaccggcgat
taccagttgcccaaagagttagagaaattccgccaatcagtactatttgaaaaaaccaaa
aagggtgaggctcctcagcacgatgtcttccatgctatagaccgtatattcgaacaacct
ctgacactaagagatctgattttagcccgagctatcagcgagatacgaatctctgtgcag
caagaaaaacgccagagggcagagctggggtttgatgatctgctcagtaaactggatgcg
gcattgcaacaagctggtggagaattgttggctcaatccattcgcactcgttatcccgta
gcaatgattgatgagtttcaagataccgacccgcaacaataccgaattttccacacactt
tatggtgggcaagaagagtgcggcctattactgattggtgaccctaaacaggctatttat
gcttttcgtggtgccgacatttttacttatattcgtgctcgctcagaagtcagtgcccac
tacacattagagactaactggcgctcatccttcccaatggtgcaatcagttaaccggctt
tttagtctggtcgatgttccttttttgtttaaacaaattccctttataaatgtggtgcct
gcgcaaaaaaataagcaattatcatttgaaataaaagggaaaaagcagccagctatgtct
ttctggttgcagtccggggacggtgttggggttagtgagtaccaacaattaatggcacgg
caatgtgccgctcaaatccgagactggcttactgctgggcaaaaaggtttggcacaatta
gtgacagccacaagttcaaggccggttaaggcgtcagatatcaccatattggtgcgtagt
cgggcagaggcggcattggtgcgcgatgccctgagtgcattggcaatcccatccgtgtat
ctctccaaccgtgatagcgtatttgatactgctgaggccaaagatctgctgtggctattg
caggctgttttggctcccgagcaggagcgggcattacgcagcgctatggcgaccggcatc
ttggggctggatgcgcgaatgttggatgagttgaatcacgatgagcgagcttgggatgct
ttggttgatgagttcgatggttatcgccaacattggcagcgccgtggggtgctcccgatg
ctgcgggagattatggctcagcgccatttagctgagaatttgctggcaactcagggcggt
gaacggcggctaacagatttgctgcatttgggcgaattattgcaagaagcagcatcacag
cttgatagtgagcacgcactcatccgttggctggcgcaacaaatagcacaaccgaatcat
cagtctgataaccaacaacttcgtttggaaagtgatcgacatttggtgcaagtcattact
atccataaatccaaaggattggaatacccgctggtttggctaccttttgtgggcaatttc
cgccagcagcaagacgtgctctatcatgatcgccacagctttgaagcattacttgatctg
aatgctgatgaagaaagccaggctttggcggaggaagaacgtctggctgaggacttacgg
ttattatacgtagcactcacccgtgcggtttatcattgcagcataggtattgccccgttg
attaaaggggggcgaaaaaaacagggtgaaagtgatatgcatctcagcgcgttaggctat
ctggtgcaacaaggtcaggcgggagatgcgcagtatcttgctgataaactggcacagtta
gcggcgctggcagatggagagatttctgtttcacaagccgggcaactggatgagacacct
tggctgccgcagcaggatgagttgccagcccttgctgctcgacagtttagtcgccaaata
cacgatttttggcgggtcaccagctattccggcctacaacagcatggctcgagtaaaagc
gtagcctcacaagcgctgagtgtaccattacaggagttattaccacggttggatactgac
gctgttggtgagcaggtattaataactgagcctcagttaacccctcataccttcccccga
ggtgcggcacccggtactttcttgcatgatttacttgaacctctggatttcagccagtcg
attgaacaagactggctgacagagcagttacagcaacaaggttttggtgagcattggtca
tctatgctgtatcagtggctaactgacattgtacaaacccctctaaatgaaaccggtgtg
acattggcgcaattgacaccacagagcaagcaagccgagttgcaattttatttgccgata
gacactttactgcaagcgcgtgagctagataccttaatcaagcactatgacccactctct
cgccagtgcccggtgttggattttcagcaagtcagaggaatgctgaaagggtttattgat
ctggttttctgctggcagggcaaatattacttattggattacaaatccaactggttgggt
gaggacagcagtgcctatacccacgatgcgatggcccaagccatggctgagcatcgttat
gacttgcaatatcagctttatactctagcattacaccgctatttgcgccatcgattgggc
cattatgactatcagcgcgactttggtggtgttatttatctcttcctgcgtggtgttgat
aaacaacatccggggaacggtatttttagctgccgccctgaacgagaactcattgagaga
atggactgtttattcagtggtcgtgaagtagggccgcatattagtgacaacagtggcatg
gcgataaccggtgagggcacatcaatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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