KEGG   Yersinia enterocolitica FORC_002: FORC2_2005
Entry
FORC2_2005        CDS       T03890                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
yef  Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:yef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yef03016]
    FORC2_2005
Enzymes [BR:yef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     FORC2_2005
Transfer RNA biogenesis [BR:yef03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FORC2_2005
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2
Other DBs
NCBI-ProteinID: AKF38152
Position
complement(2262611..2264545)
AA seq 644 aa
MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRPVRELTH
DFQTGDWAVAEMRRHPLKGDRAFNADLTAFITDGEDHFVPWWVTLARHNLEREAPVMIES
ALHDANLQREDLTALNFVTIDSASTEDMDDALHVQDNGDGSLLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTVAADGALGDDIHF
SAAWVESKAKLVYDEVSDWLEGSGDWQPQNADIAEQITLLKRVCEARSHWRETHALVFKD
RPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAAIALRDNLGFGIYNVHTGFD
PALVEQAANVLQANGVEADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIITGQQAEKPQDEITVQLAERRRLNRM
AERDVGDWLYARYLQPMAGTDTRFPAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQIKGETVYSQSDKIEVRIAEVRMETRNVVARPVV
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagactcca
cgcgtcgaaggcgtggttaaaggtactgagaaaggctttggctttcttgaggtagacggg
cagaaaagttactttattccgccaccacagatgaaaaaagtcatgcatggcgatcgtatt
attgccactcttcacaccgataaagatcgtgaaattgctgagccggaaaccctggttgag
ccatttttgtcccgctttgttggccgtgtgcaacgaaaagatgaccgcctgtctatcgtt
cctgaccatcctctgctgcgtgatgccattcaatgtcgtccagtgcgtgaactgactcac
gatttccagaccggtgattgggcggtggccgagatgcgccgccatccattaaaaggtgac
cgtgcctttaatgccgacctgactgcttttattacggatggtgaagatcactttgtccct
tggtgggtcaccctggcgcgccataatttggagcgcgaagcgcccgtcatgattgaatca
gcgttgcatgatgccaacctgcaacgggaagatttgactgcgcttaattttgtcactatc
gacagcgccagcacggaagatatggatgacgcgttgcatgtgcaagacaacggtgacggc
tccctgttgttgaccattgctattgctgaccctactgcttatgtcgatgaaaacagtgag
ttggacttaattgcccgtaaacgtgcatttaccaactatctgccgggctttaatatcccg
atgctgccacgtgatttatccgataacctttgctcactgcggccgaatgaacgccgcccg
gtattggtgtgccgcgtcactgtcgctgccgatggcgcgctcggtgatgatattcacttc
tctgccgcctgggttgagtcgaaagccaaactggtttatgacgaagtttctgattggtta
gaaggcagtggtgactggcagccacaaaatgctgatatcgctgaacaaatcaccttatta
aaacgtgtttgcgaagcgcgcagccattggcgtgaaacacatgcattggtgtttaaagac
cggcctgactatcgcttcttgttgggcgaaaaaggcgaagtgctggatatcattgttgaa
caccgtcgtattgctaaccgtattgttgaagagtgcatgattgccgccaacgtctgtgcc
gctattgcgctgcgtgataatcttggttttggtatctataacgtgcataccggttttgat
cccgcgctggttgagcaagccgctaatgtgttgcaggccaatggggtggaagccgatccg
caagcgctgctgaccttacctggtttctgtgaattgcgccgtcatcttgatgccttaccg
acccagttccttgatagtcgcatccgccgtttccagacattcgctgaaatcagcacggtt
cccggcccacacttcggtttagggcttgaagcttacgccacctggacctcgccaattcgt
aaatacggcgatatggtcaaccatcgtctgctgaaagccattattaccggacagcaagcg
gaaaaaccacaggacgaaatcacggttcaattggccgaacgccgccgtttgaatcgcatg
gcggaacgtgatgtcggtgattggttgtatgcccgttacctacaaccgatggcaggcacc
gatacgcgcttccctgcggaaatcattgatgtcactcgcggcggcctacgggtgcgctta
ctggataacggcgcagtcgcctttattcccgcgccctttattcatgcggtgcgtgatgaa
atggtctgcagccaggaaaccggcactgtacaaatcaaaggtgaaacggtttacagccag
agcgacaaaattgaagtacgcattgccgaagtgcggatggaaacgcgtaacgtggtggca
cgcccagtggtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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